|
Name : Clo1313_0980 (Clo1313_0980) Accession : YP_005687499.1 Strain : Clostridium thermocellum DSM 1313 Genome accession: NC_017304 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : - COG ID : - EC number : - Position : 1140738 - 1142822 bp Length : 2085 bp Strand : + Note : TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: cce:Ccel_1882 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase doma DNA sequence : ATGAACGGCGATATGAAAGAAATTCTGAAAAAATCAATAAAGAATGTTAAAGGTGTGGGAGATGCAAGAGCAAAACTGTT TCACAAACTTGGCATTTTTAGCATAGAAGATTTGATAACCCATTTTCCCTATGACTACGAAGACAGAAGCAATATTAAAA AAATATGTCAGCTTACCGAGGGAGAGAGCTGTACCTTTGAGGGCATTATTATGTCAAAGGTCACGGAAAGAAAAATAAGG CAGGGATTGACTCTGTATCAGGCATATATAAAAGACGATACGGGAACCATAATAGCGACGTGGTACAATCAGCCTTATAT TAAAAAAGTCCTGACCGTCGGTGAAAGCTATATTTTTTACGGCAAAATTGTACGGGGATACAAAACCCTGGAGGTGCAAA ATCCGGTTTATGAGAAAGCCTGCAAGGAAGAACATAAAAATACAATGAAAATTGTGCCCGTTTACCATGCAACGGCGAAT CTTACACAAAACACCATCAGAACCGTAATGCAAAATGCCCTGGAACTTGTTGACGGAAATTTGGAAGATGTATTGCCTTT ATGGGTGAGAAAAAAGTATTGCCTGTGCGATATAAATTATGCTTTTTCCAATATTCATTTTCCACGAAATGACGGGGATA TAAAAAATGCCAGGTACAGGCTGGTGTTTGAAGAGCTTTTTCTCTTGCAGCTTGGACTTCTTAGCGTCAAGACTGTACTT TCCGACGGAAAAGAAGGTATTGCTTTTGCGCCAAACCGAAAAGAGATGGTTGACTTTATAAACAGCATAGGCTTTACGCT TACCAATGCCCAGAAGAGGGTGTGGGAAGAGATAGAAAAGGATATGGAAAGCAACCGTGTAATGAACAGGCTTGTGCAGG GGGATGTGGGCTCCGGCAAGACGATTGTTGCGGCTCTGGCGCTGGCTAAAGCGGTAAAGAGCGGATATCAGGGGGCAATG ATGGTTCCTACGGAGATTCTTGCAAAGCAGCACTATGAATCGTTAAAGGATATTATGGGAAAGCACGGGATAAATGTTGC CTTGCTGGTGGGAAGCCAGACAAAGAAGCAAAGGAGTGAAATTCTTTCAAAAATTGAATCCGGCGAGGTTAATATAGTTA TAGGCACCCATGCACTTATTGAGGAAAAGGTCAAGTTTTCAAAGCTTGGGCTGGTTATAACCGATGAGCAGCACCGTTTT GGGGTAAGACAAAGGGCTATGCTTTCCAACAAGGGAATAAACCCGGATATTCTTGTAATGACTGCCACACCCATTCCCAG AACTCTTGCGCTAATCCTTTACGGGGATTTGGACATATCGATAATTGACGAACTTCCGCCGGGAAGAAAGCCTGTGAAAA CCTATGCGGTTGACAACAGCATGAGGCAGAGAATAAACAATTTTATAAAAAAACAGATACTTGAGGGAAGACAGGCTTAT ATAATATGTCCTCTGGTGGATGAATCGGATGAAATAGAGGCAAAATCAGCTCTAAAAACTGCGGAAAAGATAGCGAAAGA AGATTTTAAAGATTTTAGAGTCGGTTTGCTGCATGGAAAGATGCCTGCCGGCGAAAAAGAAGAGGTCATGCAGAAGTTTT TAAAAGGCGAAATTGACATTCTTGTGTCCACTACAGTTGTAGAGGTCGGAGTGAATGTTCCCAATGCAACACTGATGGTT GTTGAAAATGCCGAAAGGTTTGGACTTGCCCAGCTTCATCAATTGAGAGGCCGGGTGGGAAGAGGGCCGCACCAGTCCTA CTGCATTCTTTATAATGAGAGCAAAAGCCAGATTGCAAAAGAGAGAATGAAGGTCATGCAGGAGACCACAGACGGTTTTG TCATATCGGAAAAAGACCTTCTGATAAGGGGGCCCGGAGAATTTTTCGGAACAAGGCAGCATGGACTGCCCGATCTTAAA ATTGCAAATCTTTACAGAGATATGGAAATATTAAAAAAAGCGCAGGAAGCGGCGCAGGAAATTTTAAAAAGAGATCGAAA CTTATTTATGGAAGAAAATCTAAAGTTAAAGGAAAAAATTGCCGAGAAATTCATAGAAAAAATACATGACGTAAGTTTGA ATTAA Protein sequence : MNGDMKEILKKSIKNVKGVGDARAKLFHKLGIFSIEDLITHFPYDYEDRSNIKKICQLTEGESCTFEGIIMSKVTERKIR QGLTLYQAYIKDDTGTIIATWYNQPYIKKVLTVGESYIFYGKIVRGYKTLEVQNPVYEKACKEEHKNTMKIVPVYHATAN LTQNTIRTVMQNALELVDGNLEDVLPLWVRKKYCLCDINYAFSNIHFPRNDGDIKNARYRLVFEELFLLQLGLLSVKTVL SDGKEGIAFAPNRKEMVDFINSIGFTLTNAQKRVWEEIEKDMESNRVMNRLVQGDVGSGKTIVAALALAKAVKSGYQGAM MVPTEILAKQHYESLKDIMGKHGINVALLVGSQTKKQRSEILSKIESGEVNIVIGTHALIEEKVKFSKLGLVITDEQHRF GVRQRAMLSNKGINPDILVMTATPIPRTLALILYGDLDISIIDELPPGRKPVKTYAVDNSMRQRINNFIKKQILEGRQAY IICPLVDESDEIEAKSALKTAEKIAKEDFKDFRVGLLHGKMPAGEKEEVMQKFLKGEIDILVSTTVVEVGVNVPNATLMV VENAERFGLAQLHQLRGRVGRGPHQSYCILYNESKSQIAKERMKVMQETTDGFVISEKDLLIRGPGEFFGTRQHGLPDLK IANLYRDMEILKKAQEAAQEILKRDRNLFMEENLKLKEKIAEKFIEKIHDVSLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 3e-83 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clo1313_0980 | YP_005687499.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 4e-98 | 42 |
