Gene Information

Name : srtB (CpI19_1881)
Accession : YP_005686315.1
Strain : Corynebacterium pseudotuberculosis I19
Genome accession: NC_017303
Putative virulence/resistance : Unknown
Product : Sortase B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2048729 - 2049688 bp
Length : 960 bp
Strand : -
Note : -

DNA sequence :
ATGCTAGACCCTGTAACAAAGACTGAACGGCCTAAAGTCGTTCATCGTTTGAAACAGAAGCGAGTTGGGAAGAAAAATAA
CCATGCATTAGCTGCGCTACTCGTGATTATTGGATTAATTGTCATGGTCTACCCAGTGGTTTCGACCCAATGGAATAATT
GGAAACAGCAACGTGCAGCAGCAGAGTATGCCAAGATCGATAATTCAACGCCGAAGGTAGTTCATGAAGAAGCCTGGGAC
GCTGCTCATAAATATAACGAGGAGCGTGCACAAGGACCGATTCTTGATCCATGGGTTAGCCGTTTTGTCCCAGATAACTA
CGCGTATCAAGAATACTTAAGCGTATTAAATACGCAGGATGCAATGGGTCGTATTGTCCTTCCGTCCATAAAAACGGACC
TACCTATCTATCACGGTTCGAGCGAGGATGTCTTACAAAAAGGAATTGGTCATCTTTTTGGATCCGATCTTCCAGTGGGC
GGACGCGGGAGTCACTCGGTGTTGACTGGACATACGGGAATACCGACAGCAACACTTTTTGACAATTTAAATCGTGTTAA
AGAAGGCGATGCTTTCTTTATTCACATCGCTGGACACAAAATTAAATACGAAGTCGATCAGATCAAGATAGTTCTTCCTA
ATGAGACAGAAGATCTAAAAGTTGAAGCCGGCAAAGATTTAATCACATTAGTTACCTGTACTCCCTACGGGATTAACACA
CATCGTTTATTAGTTCGTGGACATCAAGTTCCAATAGCCGAAGAAGAAAAAAGCATGCTCAACGAGGTACAGGGTGTCTC
TTGGCAATGGTGGATGTATGCACTTACCGCAATATTCATCGTAGGAGTCATTGGGCTTATCGCGTGGTTAATAAAACAAT
CACGTGTGTCTTCTAAGCGGCATAAAGACTCTCTGATTGTCCCTGACTCCGAATCTACCGAGAATAAAACTGAACTGTGA

Protein sequence :
MLDPVTKTERPKVVHRLKQKRVGKKNNHALAALLVIIGLIVMVYPVVSTQWNNWKQQRAAAEYAKIDNSTPKVVHEEAWD
AAHKYNEERAQGPILDPWVSRFVPDNYAYQEYLSVLNTQDAMGRIVLPSIKTDLPIYHGSSEDVLQKGIGHLFGSDLPVG
GRGSHSVLTGHTGIPTATLFDNLNRVKEGDAFFIHIAGHKIKYEVDQIKIVLPNETEDLKVEAGKDLITLVTCTPYGINT
HRLLVRGHQVPIAEEEKSMLNEVQGVSWQWWMYALTAIFIVGVIGLIAWLIKQSRVSSKRHKDSLIVPDSESTENKTEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 3e-98 72
DIP0236 NP_938627.1 fimbrial associated sortase-like protein Not tested Not named Protein 2e-77 60
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 2e-69 56
srtC1 YP_005141811.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 1e-61 49
DIP0233 NP_938624.1 fimbrial associated sortase-like protein Not tested Not named Protein 8e-52 47
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 2e-51 46
srtI YP_005126714.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 2e-49 45
srtE YP_005139150.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 4e-51 42