Gene Information

Name : Cp1002_0290 (Cp1002_0290)
Accession : YP_005680564.1
Strain : Corynebacterium pseudotuberculosis 1002
Genome accession: NC_017300
Putative virulence/resistance : Virulence
Product : Membrane permease protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 304447 - 305499 bp
Length : 1053 bp
Strand : -
Note : -

DNA sequence :
TTGTTTATCAGTCAGGGGCACCAACTCACAGTGCAATACACAGGGCAGCGCACCACGATAACCACGCTGGTGCTCAGTAT
CATGGTGCTTTTTATCCCGGCATTAAGCGTATGCATCGGAGCTGCGGGAGTCGCGCCTTCCCATGTGTTTGGCGTCATTT
TAAGCCACATCCCGCATGTACCCGTCGATATCAGCTGGGATAGAGCCACCGATGCGATTATCTGGCACAACCGTTTTCCG
CGAGTGCTACTGGGACTTGCAGTCGGCGCAATATTGGGCGTCTCTGGAGTAGTCTTCCAGGCCGTAATCCGGAATTCTTT
AGCGGAGCCCTACGTCCTGGGAGTAAGCTCTGGGGCTTCCACCGGCGCGGCGTTTTCCTTGATTATCCTCGGTTTAAGCT
CCGCGTGGGCCATGGGATTCTTTGCCTTTGCCGGTTCTGTCATTGCTACATGTGCTGTTCTAATCATTGCAGGTCGCAGC
TCATCCCCACTCAAGCTCATACTTTCTGGATTAGCAATCGGATTTGGCGCACAGGCTTTTACCAACTTCATCATCTTTAC
CAACGGCTCTCCGGAGACAAACCAAGCAGTGATGTTCTGGATGTTGGGTTCCCTAGGCCGAGCGCGCTGGCAAGCGGTGG
TTGCAACAATTATTGTCGCCATCTTTTTGACTCTGCTTATGGCCATAATCGGACCGCTCTTGGATGCTCTGGCCAGTGGC
GATGAGACCGCACGGGCTGTAGGCGTGCCCCCTGAAATTACTCGGTTACTCGTTCTCATCGTGGTATCTGCCGCCGTGGC
AATAGCCGTGAGTAGCTCCGGCGGTATCGGTTTTGTTGGTCTTATTGTCCCCCACATAATGCGCATAGTCTCTGGTTATA
GTCACCGCATGTTGGTAATCAATACCGCTTTGGCCTCTGCGTTATTTCTTGTACTTGCAGATGCCTTGGCGCGGGTGCTG
ATTAGCCCGCAAGAGCTTCCTATCGGAGTGCTCACCGGCCTGATTGGCGCACCGGTTCTAGCAATCCTTATTCGACGAAC
TACAAACGTATAG

Protein sequence :
MFISQGHQLTVQYTGQRTTITTLVLSIMVLFIPALSVCIGAAGVAPSHVFGVILSHIPHVPVDISWDRATDAIIWHNRFP
RVLLGLAVGAILGVSGVVFQAVIRNSLAEPYVLGVSSGASTGAAFSLIILGLSSAWAMGFFAFAGSVIATCAVLIIAGRS
SSPLKLILSGLAIGFGAQAFTNFIIFTNGSPETNQAVMFWMLGSLGRARWQAVVATIIVAIFLTLLMAIIGPLLDALASG
DETARAVGVPPEITRLLVLIVVSAAVAIAVSSSGGIGFVGLIVPHIMRIVSGYSHRMLVINTALASALFLVLADALARVL
ISPQELPIGVLTGLIGAPVLAILIRRTTNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1769 YP_005134303.1 ferrichrome transport system permease protein fhuB Virulence Not named Protein 4e-64 64
CpI19_1928 YP_005686352.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 5e-22 41
Cp1002_1913 YP_005682168.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 5e-22 41
CpC231_1907 YP_005684260.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 5e-22 41
cpfrc_01919 YP_003784319.1 hypothetical protein Not tested PiCp 7 Protein 5e-22 41