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Name : lysS1 (Cp1002_1926) Accession : YP_005682181.1 Strain : Corynebacterium pseudotuberculosis 1002 Genome accession: NC_017300 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 2115023 - 2118274 bp Length : 3252 bp Strand : + Note : - DNA sequence : ATGTTGCATATTATCGATTGCATGCAGAAACACTGGGAAACCCGAGTAATCCTTTTTACAGCACAGTTAGCCACTATCTG GCTGATTATTGGACTGATACTAAAATATATAAACATTAATCTCATTAGGGATATTAGTTTTGGTTTTTTCTTAATCGGCC TCCCCAACTTCCCCACTCTATTTATCACCATCCTCATGGTCTTACTCACATCGGGGATGCTGCGCGGGCACCGAGGGGCG TTGCTGTTTTATCTTCTGGGATTCCAGGTGCCGGATCTGCTTTCTGGCATCTTGTTCTTCGTCTTGGGTCTCTTCAACGA TCCCGAGATTACCGGTGATAATGCCAAGTACACGATTATCGCGTTCGCAGTTTCCACGCTGTTTTCTCTGTTCTATCTTG TTTGCGGATACCGCGCGCTTAAAGACTTCCCAGCTCGCGTTGTTGGTTCCTGGGTGCGGGCTCTCAGCACGCTCATCGTT GGCCTCATTATCTCGTTTGTTGTGATGTGGGGTGTGCTGGTCTTGCAGGAGCATCAAGACAGCAGCATAGCGGCAGCCTG GTCTTTCTTCACTGCCATCGGCCTCAGCCCTTCAGAACCGCCTTTCCCAACTGAGCTGCATAGCCCGCACTTTATCCGGG TTATCGGTGGCATCCTTTCCTCCGTGGCGCTCTTTGCCGCCATCGCTATTCTCTTTGGTTCGCGCAGGCATGATGCAGCA ACGGCTGAGGAACAGCTTCTTACGCGTAAGTTACTGCTTAATCCCCCGTTGCCGGATTCACTCGCTTATTTTTCCACTCG CTATGACCGCAGCTTGATCACCTCCCCGGATGAAAAGGCTGCCGTGTCCTTCCGCGTTGTCGACGGTGTATGCCTTGCCG CTGGTGACCCCCTCGGTGATCCAGAATCCTGGCCTGCGGCTGTGGAAAACTGGCGTGAGCATAGCCGTAAGAACGGTTGG GTTCTCGGTGCTGCTTCTGTCTCAGAAGCCGGCGCGAAAGCTTATGCTGCTGCAGGCATGAGCGTGATTACGCTTGGTGA TGAGGCAGTAGTAGACGCAGAGAACTTCCATCTCAAGAATATGCCGGAGGTTCGCAAGGAGATAGCCGGACCGCGTAAAG CTGGCTATACCGTCCGGGTGCAGCGTCAGTCGCAGATCCCCGCTGAAGAGCTTCAGCATCTCTCCCAGCTCGCTGAAGCT TGGCGACGCGGCGACGAACGCGGATTCACCATGGCGTCTGGCCGCATCGGCGATCCCCGTGACTCGCGTACTGTCATAGT AACCGCCCACGATGCTGACGATAACGTCATGGGCCTGCTCTCCTTTGTTCCGTGGGGACGCCGTGGGCTTTCCCTTGACG TTATGCGCCGCAATCCTGATGCCGTCGGCGGTGTCACAGAGTTTATGGTGGTTGGTCTGGCGCAGGAAGCCGGCAACCTT GGAATATCCAAGTTTTCCCTAAACTTTGTTACCTTCCGCGAAGCTCTCGATCGTGGTACCTATGTAGCGGCTTCCCTGAG GGAGCGGCTGCTGCTCAAACTGCTTCTCCTGTCTTCTCGCTGGTGGCAGATCCAATCGTTGTACCAATCCAACGTCAAGT ATCATCCGCAATGGCAGTCGCGCTTCCTATGCATTGATCATGGATTCCACACGGCCCGCGTCCTTATTGCTTTTGCTAGC GCCGAGGGTTTCTTGCCTTGGATGAAGGAATATGGGTCTCCTGTGGGCGACCCTCAGGAGATCGCCGCGCTTGAATCCGC GGCTCTTATGCCGGCTATCGAGCCGCCAGCTTTATCGGCCCAAGAGCGCATGCGCAAGACAAAGCTGGAGGAGCTTGAGT CACTCAGCATGAGCCCCTACCCGCCGGCTGTGCCTCGGACTACTTCTATTAAAGAATTGCTCGCAGCAGATGCGACCCAC ACCGTTTCAGAAGCGCCGATCTCAGTCACCGGTAGAGTCGCTTTTATCCGTGATCATGGCGGAGTGGTCTTTGCGGATTT GGTTGAGGAGCACACAAAGCTCCAGCTAGTGATTGAGCGCAGTGCAGGACAGACGATGACCTTGTTTAAGCACTTGGTCA GCCGCGGTGACCTCATTTCTGCCACAGGTCAGTTGGGGGAGTCTCGCAACGGTACTCGTTCCCTCATTGTCTCTTCCTGG GATATGGCCGCTAAATCGCTTACGCCGATGCCTCGCGTCCCGCTCAGCAACCCGCACTTGCGGGCAAAGTTCCGCCACAT GGACTTTGCGCTTAATAAAAAAGCTACGGATATCTTCCTTGCCCGTTCCAAGGCCGTCAGCGCAGTACGCTCCGTGCTGC AAGAGCAGGGCTATATGGAAGCCGAAACCCCCATTCTGCAGACCATCCATGGTGGTGCAAATGCTCGCCCCTTCAGGACT CATATCCGAGCATACGATCAAAACCTCACGCTCAGGATCGCGCCCGAGCTGTACCTCAAGCGCCTGGTGGTCGGCGGCAT CCCTCGTGTCTTTGAGATAGGAAGGAACTTCCGTAACGAGGGCGTGGATTCCACCCACAACCCCGAGTTCACGTCGCTGG AGGCCTACCAGTCTTATGGCAACTGGGACACCATGCGGGTGCTTACAGAAGAGCTGATTCGTTCCGCAGCAATCGCCGTC TACGGGAAGCCAGAGGTGACTACGGCGGACGGACAGATCCTTGATCTCACCGGATCCTGGCCTGTTGTTCCTGTGTATGA TGCGGTGTCTGAGGCCGTCGGCAAGCATATTTCCCCAGACGCAGATGTTTCCGAATATGCAGACATCGCGGAGAAATACG GCATCACCGCCGCCACCGTGGGTGATCTGGTCAACGAGCTTTACGACGAACTCATCGAACCCAACACCGTCTTCCCCACC TTCTACGCTGGATTCCCGGTGGAGACTTCGCCGCTCACAATGGCAGATCCAGATCAGCCGCGCATCGCCCAGCGTTGGGA CCTTGTAGCCTGCGGGATGGAGCTAGGCACCGCCTACACAGAGCTCGCGGACCCGCTGGAACAATACGCTCGTCTTTCCG ATCAGTCTCTACGCGCCGCTGGCGGCGACGCCGAGGCAATGGAATTGGATGAGAACTTCCTCAAGGCGCTGCAGTTTGGC ATGCCGCCCACAGGCGGCCTAGGAATCGGAATTGATCGCTTGGTCATGTTCCTCACCGGCCAAAACATCCGCGAAGTTCT CTCCTTCCCCTTTGTCAGACCAGATACGGACGGATCAGCTCGGGGTTGTTAA Protein sequence : MLHIIDCMQKHWETRVILFTAQLATIWLIIGLILKYININLIRDISFGFFLIGLPNFPTLFITILMVLLTSGMLRGHRGA LLFYLLGFQVPDLLSGILFFVLGLFNDPEITGDNAKYTIIAFAVSTLFSLFYLVCGYRALKDFPARVVGSWVRALSTLIV GLIISFVVMWGVLVLQEHQDSSIAAAWSFFTAIGLSPSEPPFPTELHSPHFIRVIGGILSSVALFAAIAILFGSRRHDAA TAEEQLLTRKLLLNPPLPDSLAYFSTRYDRSLITSPDEKAAVSFRVVDGVCLAAGDPLGDPESWPAAVENWREHSRKNGW VLGAASVSEAGAKAYAAAGMSVITLGDEAVVDAENFHLKNMPEVRKEIAGPRKAGYTVRVQRQSQIPAEELQHLSQLAEA WRRGDERGFTMASGRIGDPRDSRTVIVTAHDADDNVMGLLSFVPWGRRGLSLDVMRRNPDAVGGVTEFMVVGLAQEAGNL GISKFSLNFVTFREALDRGTYVAASLRERLLLKLLLLSSRWWQIQSLYQSNVKYHPQWQSRFLCIDHGFHTARVLIAFAS AEGFLPWMKEYGSPVGDPQEIAALESAALMPAIEPPALSAQERMRKTKLEELESLSMSPYPPAVPRTTSIKELLAADATH TVSEAPISVTGRVAFIRDHGGVVFADLVEEHTKLQLVIERSAGQTMTLFKHLVSRGDLISATGQLGESRNGTRSLIVSSW DMAAKSLTPMPRVPLSNPHLRAKFRHMDFALNKKATDIFLARSKAVSAVRSVLQEQGYMEAETPILQTIHGGANARPFRT HIRAYDQNLTLRIAPELYLKRLVVGGIPRVFEIGRNFRNEGVDSTHNPEFTSLEAYQSYGNWDTMRVLTEELIRSAAIAV YGKPEVTTADGQILDLTGSWPVVPVYDAVSEAVGKHISPDADVSEYADIAEKYGITAATVGDLVNELYDELIEPNTVFPT FYAGFPVETSPLTMADPDQPRIAQRWDLVACGMELGTAYTELADPLEQYARLSDQSLRAAGGDAEAMELDENFLKALQFG MPPTGGLGIGIDRLVMFLTGQNIREVLSFPFVRPDTDGSARGC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 100 |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 99 |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 99 |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 0.0 | 99 |
