Gene Information

Name : Cp1002_1472 (Cp1002_1472)
Accession : YP_005681739.1
Strain : Corynebacterium pseudotuberculosis 1002
Genome accession: NC_017300
Putative virulence/resistance : Unknown
Product : Na+/H+ antiporter NhaC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1615652 - 1617022 bp
Length : 1371 bp
Strand : -
Note : -

DNA sequence :
ATGAATGCTGTCTTGATCGCTGTTGTTGTGATGCTTGCGTTGGCCGTCGCACGAGTTCACGTGGTTTTAGCGCTTTTCAT
CGGCGCTTTAGTGGGCGGACTGGTGAGCGGCATCGGGCTTGACTCCACAATGGTTGCGTTCCAAGAAGGCCTGGCTGGTG
GGGCAAAAATCGCGCTGAGCTACGCGATGCTGGGGGCCTTTGCCATGGCGGTGGCCAGCTCGGGACTTCCTAAGCTGCTA
GCAGATGCGATCATGAAGCGTATCGACGCAGACTCCGAAGGCGCAGGCTCCAACGCCGTTGCCGTGACTAAGTGGTTGAT
GCTGGCAGGTATCTTGGCGATGGCAATTATGAGCCAGAATCTTATACCCGTGCACATTGCATTTATTCCGCTTATTGTTC
CGCCACTGCTCGGGGTAATGAATAAGCTGAACCTTGACCGTCGATTGGTAGCGTGCGTGATCACTTTTGGTCTAGTGACC
ACGTATATGTGGATACCTCTCGGCTTTGGTTCGATCTTTCTTAATGAGATTCTCTTGGGCAACATCCAAGCAGCGGGCAT
GGATACGTCGGGGATCAACATCATAAAGGTGATGGGAATCCCTGCGCTCGGCATGCTCGTGGGGCTATTGATTGCTGTGT
TTATTAGCTATCGACGCCCGCGTGTTTACGCCTCTGTTGTTGTTGCGGAACAAGCTGGAAGTAATGGCGCTCAGCCAGAA
CGCGGGGCAGTTTCCCGCTATAAGGTCGCGGTTTCCATCGTGGCCATTGTGGTTACTTTTGTGGTTCAGATTGTTATGCA
ATCTGTGGACACCGAGGCAGATCCACTTCTTATAGGCACATTGGCTGGATTGGCTATTTTCATGCTCACTGGAGCCGTGA
ACTGGCGTGAAGCCGATGACGTCTTCAGCCAAGGTATGAAGATGATGGCGATGATTGGGTTCATCATGATCACGGCCCAG
GGCTTTGCGTCGGTGATGAAGAAGACGGGAGAAGTCGAAGCGCTTGTTCATACTTCTGCTGAGTTATTTGGTGATAACAA
AGCAATAGGCGCGCTGGTGATGCTGCTTGTCGGACTTGTGGTGACTATGGGAATCGGTTCTTCCTTTTCTACACTTCCGA
TCATCGCGACTATTTATGTTCCGCTTTGTACTGCTATGGGCTTTTCTCCCGCTGCCACTGTGGCAATTATCGGAGCTGCC
GGCGCGTTGGGAGACGCTGGATCGCCTGCCTCAGATTCCACCCTTGGCCCGACTTCTGGTTTAAATGCGGATGGCCAGCA
TGACCATATTCGAGATTCGGTCATTCCTACCTTCCTTCACTACAACCTCCCGCTTATTGCATCGGGATGGGTTGCCGCGA
TGGTTCTTTAA

Protein sequence :
MNAVLIAVVVMLALAVARVHVVLALFIGALVGGLVSGIGLDSTMVAFQEGLAGGAKIALSYAMLGAFAMAVASSGLPKLL
ADAIMKRIDADSEGAGSNAVAVTKWLMLAGILAMAIMSQNLIPVHIAFIPLIVPPLLGVMNKLNLDRRLVACVITFGLVT
TYMWIPLGFGSIFLNEILLGNIQAAGMDTSGINIIKVMGIPALGMLVGLLIAVFISYRRPRVYASVVVAEQAGSNGAQPE
RGAVSRYKVAVSIVAIVVTFVVQIVMQSVDTEADPLLIGTLAGLAIFMLTGAVNWREADDVFSQGMKMMAMIGFIMITAQ
GFASVMKKTGEVEALVHTSAELFGDNKAIGALVMLLVGLVVTMGIGSSFSTLPIIATIYVPLCTAMGFSPAATVAIIGAA
GALGDAGSPASDSTLGPTSGLNADGQHDHIRDSVIPTFLHYNLPLIASGWVAAMVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1472 YP_005681739.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 2e-163 100
cpfrc_01481 YP_003783881.1 hypothetical protein Not tested PiCp 5 Protein 2e-163 100
CpC231_1474 YP_005683838.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 4e-163 99
CpI19_1481 YP_005685924.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 4e-163 99
BJAB07104_00352 YP_008207817.1 putative permease Not tested AbaR25 Protein 5e-78 50
BJAB0868_00356 YP_008211682.1 putative permease Not tested AbaR26 Protein 5e-78 50