Gene Information

Name : Cp1002_1452 (Cp1002_1452)
Accession : YP_005681718.1
Strain : Corynebacterium pseudotuberculosis 1002
Genome accession: NC_017300
Putative virulence/resistance : Unknown
Product : RNA polymerase factor sigma 70
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1591211 - 1591798 bp
Length : 588 bp
Strand : -
Note : -

DNA sequence :
ATGGCTACCGAGCCGAGAACTATCAAGATCCAGCTCAAGCATGAGCACACCGAGGGGATCAGCGAACGCTATCCCACCAC
CAGCGTCACCTATCTCATAACGGCCAGCGAAGCGCAGATCATGGTTGAATGCGACCTACACCTGCGCCGCCAGGAAGTGG
CAGATCCAGAACAGGCAGAGCGTCGCAGCCTTCACGAGATCTGTGACGAGCTGGGTAAGCACGATTACAACAACGCGAAG
CAGCACCTTCGTAACACCACCTATCGGTCCGTGTCGGCAAAGGATGATGATGACGAGATACCCGTCATTGACGCTGTTGC
CTCTAGTGCGGAGGATCCGCGATCCCGGGTATGGACGGGACGGCGAGGCGAGTATGTGCAGCTTAGACCAGATGAGGCAT
GGGTCACTCAGCTTGAGGTGCGTGAGGCCTTGGCGAGTCTCGATCCGAAGGATCGCCTGGTGGTGGTTGGCATCCATATG
CACGGCTATACCCAATCCCAGATCGCTCGCGTTTTGGGCATATCTCAACCAGCGGTGGCGAAGAGGCTGAAGAAGGACGA
AGCACGCCTGCGCGAGCTTCTGTCCTAG

Protein sequence :
MATEPRTIKIQLKHEHTEGISERYPTTSVTYLITASEAQIMVECDLHLRRQEVADPEQAERRSLHEICDELGKHDYNNAK
QHLRNTTYRSVSAKDDDDEIPVIDAVASSAEDPRSRVWTGRRGEYVQLRPDEAWVTQLEVREALASLDPKDRLVVVGIHM
HGYTQSQIARVLGISQPAVAKRLKKDEARLRELLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1452 YP_005681718.1 RNA polymerase factor sigma 70 Not tested PiCp 5 Protein 5e-88 100
cpfrc_01456 YP_003783856.1 hypothetical protein Not tested PiCp 5 Protein 1e-87 99