Gene Information

Name : Cp1002_0980 (Cp1002_0980)
Accession : YP_005681251.1
Strain : Corynebacterium pseudotuberculosis 1002
Genome accession: NC_017300
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1057638 - 1060334 bp
Length : 2697 bp
Strand : +
Note : -

DNA sequence :
ATGTCACCGACCACGGGCGTAACCGCAGAACGCGTCAATGAAGACATAAAAGATGATGATAAGGCTAATGCGGAGTTCAA
CCGATCTTCGACAAAATTCTCCGCGAGGATGATACGCAATTATTTAGATAAAACACGGATTGCATGGATTCCTATCACGT
CAATACGACGGATACTTTTCCCTATATTTACTTCCGGGAAAAGCATTATTAAACGAGTCCCGATCTCGTTTTTGTTGCTT
GCTCTCTTATGGATTCTTTATGCAAGCATTGATCATCCGCGAGATGTGCTGGGATTGAACTCATCGGAGAAACTACCATC
GTGGCACCTTCTTACTGCAGGCTTTACGGTAGGTTCGCATCAATCCGCAGTATTGGCAACTCTCGGAATTCTATTTTTGG
CTGTTCCTGCTGAATTTGTGCTGGGATCGACTCGATTCTTAGTAGCAGTTGGGGTACTAAACGGAATTTCTATTCCACTA
GGGATCCTTAGCGCTCGCTTTATTGAGACTTTAGGTCTTAATCAGTGGGGTAATGACCTGCTTAATGAGACACTACTGAG
TCCGAGCGGCTGGATTTTTGGAACTGCTGCAGTCGCCTCTTCCGCAATGTCTACGTTGTGGCGGCGTCGACTCAGACTGG
TGCTCTTTTCTCTGTCCTTTACTCTAGTGCTGTTTTCTGGGACCTTGACAGATTCAGTAGCAACGGTGGCTACTATCATC
GGTACCATTATTGGGGCTGTTCAACTTGGGGGAAGAAAATACCAGAGAATAAAGATCATTTTCCGGCGTCCCTCGCTTAG
AGAATCTCGTATTTTGGTAGCAGTGCTCTGTATGAGTGTGGCTTTGGGACCTGTTGTTGTTGCCTTTAACCCTTACGCGC
ACGGTCCATTTTCTATGGTGACCAGCTTGATGTGGCAGCCGCATATTTCTTCAGCTGATGTGGCAGAGATTTGTGCACCA
GATTATTCCTCACCAGAATGCATCGATGCACTAACTCTGACTCGACAAACGGGTTTTGCAGCTATTTTTGCTAACTTAGT
CCCGGTTATTGCGCAGTTAATCTTCTGTATTGGCCTGATCCGTGGACGTCGAGTAGCTTGGGGCTTCTCTCTTGTGCTGC
AGTGCTTGTCGCTTTTTGCGATCGCAGTTCAGCTTATTGCGATTACTGATGAACGCGGCAATTCGCTAATTTTCACAGTC
AATTTCTTTGAAGTCATGTTGCCGTGGTTAGTTACACTATTGGCTCTTGGCGTTAGCCAACGACTGTTCTTTGTGAATGT
AGAGCGTAAAGAGGTTGTACGAAACCTGTCATTAATTTTGGCCACGTTTGTGATCACAGCGTTAACGTGGATAATAGGCG
TTTATTATCTGGCAGATAACTTTAGCTCGTTGGATTCTTTGCTTTATGCCTTTTATGAATTGCCTAGTAGATATCTTCCT
CCGGCTTTATCTTTAGTACTACAACACGTGCTGTATCCGGAGAGCCAACCTGCCTGGATACTTTATCAATGGGTAGGGGC
AGTGTTCTGGATGGTGGCATTGTTTGCCCTTTACAGACTCATCATGAGCATCCCTGCGACTGGACATAATGCGTCGGATA
TTGTCACAGCTCGCAAGATCCTACGTAATGGTTCTGGTGATCATCTGTCTTGGATGAGTATGTGGGACGGAAATAGTTTC
TGGTTTGCTGCGCCTAAGTTAGAGGAGAATGCTGCTGAGACTCCAGCTGAAGACGAGTCCCAAACTGAGCCGCTCCCGCG
TGGTTTTGTTGCGTTTAGATTGGTTAAAGGCATAGCGGTAACTCTCGGAGAACCTGTGGTTCTGGATCAGAAAGACAGGT
TGGCTGTAGCGCGAGAATTCAAAGCATATGCGTCTGGGCGCGGATGGCGAGTCGCATGGTATTCCACGCGTGAGGAGTTT
GCTGAGGAAATCCGTGTTGATGGCTTTAGAAAGCTGCATGTTGCAGAAGAATCTGTTTTGCATACCACCAACACCGAATT
TAAAGGGAAGAAGTTTCAAAACATCCGTACTGCGCGTAATCGAGCTGTTAAAGAAGGCATTAGCACAGTATGGACATCTT
GGGCAGAGGCCTCTCCTGATCTGCAAAATAGGATTGTTGTGCTTTCTGAGGAATGGGTTTCAGAAAGAGCATTGCCCGAA
ATGGGATTCACGCTTGGCACTCTGGAAGAGCTCAAAGACTCTGAGACCAAGTTACTGGTTGCAGTCGATGAAAATGGGCA
TGTACATGGTATAACAAGCTGGTTGCCTGTTCACGAAAACGGTGTTCTTGCCGGGTACACTTTGGACTTCATGCGTCGCG
ACACCAACGGCTTCCGGCCTGTCATTGAGTTTTTGCTGGCTGAAGCACTGATTAAGGCGAAAGAACTCGGGTGCTCGTGG
GTCTCACTTTCGGGAGCGCCGCTTGCCCCGCCATCGGGACAAACAATGCCTACGCTTCTCGACGCAACACTGAATAAGGC
AGGAGAAGCTATCGAACCTTTGTATGGGTTTAGATCTTTGGCGGCATCCAAATATAAGTTCCACCCTGAACATCGAGCCT
GGTATTTATGCTATGACGACGAGCTAGCTTTGCCGACAATCGGCCTAGCGGTTTCTCAATGTTATCTCCCTCAGCTAAGC
GCTAAAGACGCTCGTGCCGCGCTTATTACTTGGGTACGAGCACAGCGAATGCCATAA

Protein sequence :
MSPTTGVTAERVNEDIKDDDKANAEFNRSSTKFSARMIRNYLDKTRIAWIPITSIRRILFPIFTSGKSIIKRVPISFLLL
ALLWILYASIDHPRDVLGLNSSEKLPSWHLLTAGFTVGSHQSAVLATLGILFLAVPAEFVLGSTRFLVAVGVLNGISIPL
GILSARFIETLGLNQWGNDLLNETLLSPSGWIFGTAAVASSAMSTLWRRRLRLVLFSLSFTLVLFSGTLTDSVATVATII
GTIIGAVQLGGRKYQRIKIIFRRPSLRESRILVAVLCMSVALGPVVVAFNPYAHGPFSMVTSLMWQPHISSADVAEICAP
DYSSPECIDALTLTRQTGFAAIFANLVPVIAQLIFCIGLIRGRRVAWGFSLVLQCLSLFAIAVQLIAITDERGNSLIFTV
NFFEVMLPWLVTLLALGVSQRLFFVNVERKEVVRNLSLILATFVITALTWIIGVYYLADNFSSLDSLLYAFYELPSRYLP
PALSLVLQHVLYPESQPAWILYQWVGAVFWMVALFALYRLIMSIPATGHNASDIVTARKILRNGSGDHLSWMSMWDGNSF
WFAAPKLEENAAETPAEDESQTEPLPRGFVAFRLVKGIAVTLGEPVVLDQKDRLAVAREFKAYASGRGWRVAWYSTREEF
AEEIRVDGFRKLHVAEESVLHTTNTEFKGKKFQNIRTARNRAVKEGISTVWTSWAEASPDLQNRIVVLSEEWVSERALPE
MGFTLGTLEELKDSETKLLVAVDENGHVHGITSWLPVHENGVLAGYTLDFMRRDTNGFRPVIEFLLAEALIKAKELGCSW
VSLSGAPLAPPSGQTMPTLLDATLNKAGEAIEPLYGFRSLAASKYKFHPEHRAWYLCYDDELALPTIGLAVSQCYLPQLS
AKDARAALITWVRAQRMP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_0980 YP_005681251.1 hypothetical protein Not tested PiCp 4 Protein 0.0 100
cpfrc_00986 YP_003783387.1 hypothetical protein Not tested PiCp 4 Protein 0.0 99
CpC231_0981 YP_005683342.1 hypothetical protein Not tested PiCp 4 Protein 0.0 99
CpI19_0985 YP_005685428.1 hypothetical protein Not tested PiCp 4 Protein 0.0 99