Gene Information

Name : H04402_00956 (H04402_00956)
Accession : YP_005677509.1
Strain : Clostridium botulinum H04402 065
Genome accession: NC_017299
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : 2.3.1.28
Position : 1051196 - 1051846 bp
Length : 651 bp
Strand : +
Note : -

DNA sequence : 
ATGAATAATACATTTAATCATTGGACAGAAATAAAATATTTAAAGGACTCAATAAAAAATCCCTTAATTGAAGTAGGAGA
ATACACATATTATTCAGGATATTATGCAGGTGGAGATTTTGAAGATGTTTGTGTGCGATATATATGGGGAGACGAAAAAT
CAAAAGAAATGTACAATCCTATAGAAGATTATGGATGGACTTTAGATAAAATAAAAATAGGTAAATATTGTTGTTTTGCT
AGCGGAGTAGCATTTATGATGGGAGGAAATCACAATCATAATCCTAATTGGATAACTGTATATCCATTTAAAAATAAGTT
GCTAGATTCATATAAGCGTAAAGGAGATACAATTGTAGGTAATGACGTATGGATTGGTACAGAAGCAATGATTATGCCAG
GAATTACAATTGGGGATGGGGCAATAATCGGAGCTAGGTCAATAGTTACAAAAAATGTAGAACCTTATACTGTTGTAGCA
GGAAATCCAGCAAAACATATAAAAGAAAGATTTGATAAAGAAAAGATAGATATATTACTTAAAATAAAATGGTGGGATTG
GGAAGAAGATCATATTAAAAAATGTATAGATATATTGTCTAGTTCAGATATAGATAAATTATATAAATATTATGAAATGA
ATATAAAATAA

Protein sequence : 
MNNTFNHWTEIKYLKDSIKNPLIEVGEYTYYSGYYAGGDFEDVCVRYIWGDEKSKEMYNPIEDYGWTLDKIKIGKYCCFA
SGVAFMMGGNHNHNPNWITVYPFKNKLLDSYKRKGDTIVGNDVWIGTEAMIMPGITIGDGAIIGARSIVTKNVEPYTVVA
GNPAKHIKERFDKEKIDILLKIKWWDWEEDHIKKCIDILSSSDIDKLYKYYEMNIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 1e-24 48
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 9e-24 47
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 9e-24 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H04402_00956 YP_005677509.1 chloramphenicol acetyltransferase CP001581.1.gene990.p Protein 4e-81 99
H04402_00956 YP_005677509.1 chloramphenicol acetyltransferase JF268688.1.gene6.p01 Protein 1e-23 51
H04402_00956 YP_005677509.1 chloramphenicol acetyltransferase CP000675.2.gene50.p0 Protein 5e-31 50
H04402_00956 YP_005677509.1 chloramphenicol acetyltransferase AY123251.gene2.p01 Protein 5e-25 48
H04402_00956 YP_005677509.1 chloramphenicol acetyltransferase AF322577.2.gene4.p01 Protein 5e-24 47
H04402_00956 YP_005677509.1 chloramphenicol acetyltransferase AY740681.1.gene5.p01 Protein 5e-24 47
H04402_00956 YP_005677509.1 chloramphenicol acetyltransferase NC_002516.2.878374.p Protein 2e-22 43
H04402_00956 YP_005677509.1 chloramphenicol acetyltransferase AM180355.1.gene2499. Protein 5e-18 41