Gene Information

Name : H04402_03720 (H04402_03720)
Accession : YP_005680247.1
Strain : Clostridium botulinum H04402 065
Genome accession: NC_017299
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3895460 - 3896797 bp
Length : 1338 bp
Strand : -
Note : -

DNA sequence :
ATGGATGCACCCATAAAAAGTATGCCGCAGAGTATAGATGCAGAGCAGAATGTATTAGGGGCAATGATTATAGATAAAAC
TTCCATAGCAGAGGCTGTGGAAGTTTTAAAAAGTGAAGATTTTTATAAAGATTCTCATAAAATTATATTTAGTGGAATTG
TAGAGCTTTATCAAAAGGATATAGCAGTAGATATGCTAACTCTTACGGAAAATCTTAAGTCACGAGATAAACTAGATGCA
GTAGGTGGGGTTACTTATATAACAGAGCTTTGTAACTCTATAGTTTCTACAGCTAATATTCAGTCTTATATAGATATAAT
AAAGGATAAATCTACATTAAGAAGGCTTATAAAGTCATCTACTGAAATAATAGAGAACTGTTATAACAGACAGGATAATG
TAGAAGAAATAATAGATTCTGCAGAGAAAAAAATATTTCACATATCCAACCAAAATACTACAACTGATTTTGAACCATTA
AGTAATGTTTTGGAAAGAGGATTTATTCAAATTGAAAACTTATTTAAAAATAAAGGTGAAACTACAGGGGTTGCATCTGG
TTTTAGAGAACTAGACGCTAAAACCTCAGGTTTTCAAAAGTCTGATATGATATTAATAGCAGCAAGGCCATCAATGGGTA
AAACTACATTTGCTCTAAACATAGCAGAATATGCAGCTCTTAGAGAGGGAAAAAGTGTAGCAATCTTTTCCCTGGAAATG
TCAAAAGAGCAACTTTCTTATAAATTGCTTTGTTCCCAAGCTAATATTGATATGTTGAGGCTTAGAACTGGTAACTTAGA
GGATAAAGACTGGGAAAATATAGCTAGGGTTTCAGGGCCTTTAGCAGCAGCAAAGATATTTATAGATGATACTGCAGGTA
TGTCTGTAATGGAAATGCGTTCTAAATGTAGGAGATTAAAAATAGAACATGGAATAGATATGGTTTTAATAGATTATCTT
CAGCTTATGAGTGGAGGTAAAGGGTCTACTGAAAGTAGACAACAAGAAGTCTCAGAAATATCTAGATCTATAAAAGCCTT
AGCTAAAGAAATGGATTGTCCAGTTATAGCCTTATCTCAATTATCTCGTGCTCCGGAGGCTAGATCAGATCATAGACCAA
TGCTTTCAGATCTTAGAGAATCTGGATCTATAGAACAGGATGCTGACGTAGTTATGTTTTTATATAGAGATGAATACTAT
GACAAAGAAACAGAAGATAAAAACATGGCAGAATGCATTATAGCCAAGCAAAGAAATGGTCCTACGGGTACAGTTAAAAT
GGCATGGCTTGGACAGTACAGTAAATTTGGCAATTTAGATGTAATACATCAAGAATAA

Protein sequence :
MDAPIKSMPQSIDAEQNVLGAMIIDKTSIAEAVEVLKSEDFYKDSHKIIFSGIVELYQKDIAVDMLTLTENLKSRDKLDA
VGGVTYITELCNSIVSTANIQSYIDIIKDKSTLRRLIKSSTEIIENCYNRQDNVEEIIDSAEKKIFHISNQNTTTDFEPL
SNVLERGFIQIENLFKNKGETTGVASGFRELDAKTSGFQKSDMILIAARPSMGKTTFALNIAEYAALREGKSVAIFSLEM
SKEQLSYKLLCSQANIDMLRLRTGNLEDKDWENIARVSGPLAAAKIFIDDTAGMSVMEMRSKCRRLKIEHGIDMVLIDYL
QLMSGGKGSTESRQQEVSEISRSIKALAKEMDCPVIALSQLSRAPEARSDHRPMLSDLRESGSIEQDADVVMFLYRDEYY
DKETEDKNMAECIIAKQRNGPTGTVKMAWLGQYSKFGNLDVIHQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 2e-72 42
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 2e-72 42
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 6e-75 41
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 8e-84 41
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 5e-79 41
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 3e-80 41
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 9e-81 41