Gene Information

Name : H04402_03622 (H04402_03622)
Accession : YP_005680148.1
Strain : Clostridium botulinum H04402 065
Genome accession: NC_017299
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 3792689 - 3794203 bp
Length : 1515 bp
Strand : -
Note : -

DNA sequence :
GTGTCAAAGGAAGATAATGTGATAAACAGTTTTGAAGAACAAGCAAATGAATTAATGAAGGAAAGATTCCAAAAGTTAAA
GGAACTTCAATCTAATGGCAAAGATCCATTTGATGTTTATAAGGTTGAAAGAACCCATACTTCAAAAGAAGTAAAGGATA
ATTATGAAGATCTAGAAGGAAAAACTGTTACAGTGGCAGGAAGACTTATGTCAAAAAGAGTTCATGGAAAAGCTGGATTT
TCAGATATACATGATAGATATGGAAAAATTCAATTATACATAAAGATAAATGATGTAGGGGAAGAAAAACTTAAAGAATA
TAAGACTTTTGATATAGGTGATATAATAAGTGTAACAGGAACAGTTTTTAAAACAAAAACAGGAGAAACATCAATACACA
TAACAGATTTTCAATTAGTTTGTAAATCTTTAAGACCATTACCAGAAAAGTGGCATGGATTAAAAGATCCAGATTTAAGA
TATAGACAAAGATATGTAGATTTAATAATAAACCAAGATGTTAGAGATACTTTTATAAAAAGAACAGCTATAATTAAGTC
TATGAGAGAATTCTTGGATAATAGAGGATTTTTAGAAGTAGAAACACCAATATTATCACCAATAGCAGGCGGGGCAGCAG
CTAAGCCTTTTATTACTCATCATAATGCTTTAGATATAGATATGTATCTTAGAATAGCTACTGAATTATATCTAAAAAGA
TTAATAGTAGGTGGCTTTGAAAAAGTATATGAGATTGGTAAAAACTTTAGAAATGAAGGAATAGATATAAGACATAATCC
AGAATTTACAGCTATAGAATTATATGAAGCTTATGCGGATTATAATGATATGATGGAAATCACAGAAAATATGATAGCTT
ATATATGCGAAAAAGTTTTAGGTACAACTAAAGTTGAATATGAAGGAGAAGAAATAGATTTTACACCACCTTGGAGAAGA
TTAACTATGGTAGATGCTGTAAAGGAATATGCAGGAGTAGATTTTAACATTATAAAAAATGACATCGAGGCAAGAACAAT
CGCAAAAGAAAAACATATAGAATTTAAAAAAGAATTAAAGGATTGCACAAAAGGTGATGTACTTATAGGATTATTTGAGG
AATTCTGTGAAGACAAGTTAATGCAACCTACTTTTATTTGTGATTATCCAGTAGAAAATTCACCTCTTACAAAGAAGAAA
AGAGGAAATGAAGCATTTACTGAAAGATTTGAAGGCTTTGTATTTGGAAGAGAAGTATGTAACGCATATTCTGAATTAAA
TGATTCTATAGTTCAAAAAGAAAGATTCATGCAACAATTAAAGGAAAGAGAATTAGGTGATGATGAAGCTTATATGATGG
ATGACGACTTTATAACTTCATTAGAAGTAGGTATGCCACCGACAGGAGGATTAGGAATAGGTATTGATAGATTAATAATG
TTCTTAACAGATACACATTCTATAAGAGATGTTATACTATTCCCAACTATGAAACCGCAACCTAATAATCAATAA

Protein sequence :
MSKEDNVINSFEEQANELMKERFQKLKELQSNGKDPFDVYKVERTHTSKEVKDNYEDLEGKTVTVAGRLMSKRVHGKAGF
SDIHDRYGKIQLYIKINDVGEEKLKEYKTFDIGDIISVTGTVFKTKTGETSIHITDFQLVCKSLRPLPEKWHGLKDPDLR
YRQRYVDLIINQDVRDTFIKRTAIIKSMREFLDNRGFLEVETPILSPIAGGAAAKPFITHHNALDIDMYLRIATELYLKR
LIVGGFEKVYEIGKNFRNEGIDIRHNPEFTAIELYEAYADYNDMMEITENMIAYICEKVLGTTKVEYEGEEIDFTPPWRR
LTMVDAVKEYAGVDFNIIKNDIEARTIAKEKHIEFKKELKDCTKGDVLIGLFEEFCEDKLMQPTFICDYPVENSPLTKKK
RGNEAFTERFEGFVFGREVCNAYSELNDSIVQKERFMQQLKERELGDDEAYMMDDDFITSLEVGMPPTGGLGIGIDRLIM
FLTDTHSIRDVILFPTMKPQPNNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 8e-109 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H04402_03622 YP_005680148.1 lysyl-tRNA synthetase VFG1668 Protein 5e-109 49