Gene Information

Name : H04402_03445 (H04402_03445)
Accession : YP_005679972.1
Strain : Clostridium botulinum H04402 065
Genome accession: NC_017299
Putative virulence/resistance : Resistance
Product : two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3608480 - 3609172 bp
Length : 693 bp
Strand : -
Note : -

DNA sequence :
TTGAGTTATAAAATGTTAATAGTAGATGATGATAAGACCATAGTAGAATTTTTACAAATATTTTTAATTAAAGAAGAGTA
TGAGGTAAGGATCTCTTATAATGGAGAAGAGGCTTTAGATAAAATAAGAAGTGAACAATTTAATTTGATTCTAATGGATA
TAATGATGCCCAAATTAGATGGATTTGAAGCTATTAAAAGAATAAGAAGACTTACCAATATTCCTATTATATTTTTAACT
GCAAAAGATAGTCAGCAAGATAAAATTAAAGGCTTCATTTCTGGATGTGACGACTACATAACAAAGCCCTTTGATTTAGT
AGAGCTTTCTTTAAGAGTGTCCGCTATACTTAAAAGAGTTAGCACAAGTGTAATTGAAGAAAATGAGGATATTATAAAAG
TGAAGGATTTAGAATTAAATTTAAAGGAGCATACACTATATAAAGAAAAAAATGAAATAAAGCTTACGCCAAAAGAATTT
GACATTTTATTTTTGCTTGCTAGAAATAAGGGGAGAATTTTTCCTTCAAGTGAGATATATGAAAGGGTATGGGGACAAGA
ATTTTTAGAAAATGACAATAGCTTGTTGACCCATATTAGAAATTTAAGAGAAAAGCTAAGTGATACTGTAAAAAACTCAA
AATACATTAAAACTGTTTGGGGAGTGGGTTATAAGATTGAAAAGGAAGCTTAG

Protein sequence :
MSYKMLIVDDDKTIVEFLQIFLIKEEYEVRISYNGEEALDKIRSEQFNLILMDIMMPKLDGFEAIKRIRRLTNIPIIFLT
AKDSQQDKIKGFISGCDDYITKPFDLVELSLRVSAILKRVSTSVIEENEDIIKVKDLELNLKEHTLYKEKNEIKLTPKEF
DILFLLARNKGRIFPSSEIYERVWGQEFLENDNSLLTHIRNLREKLSDTVKNSKYIKTVWGVGYKIEKEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_001698483.1 regulatory protein Not tested Not named Protein 1e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H04402_03445 YP_005679972.1 two-component response regulator NC_005054.2598277.p0 Protein 4e-44 45
H04402_03445 YP_005679972.1 two-component response regulator NC_014475.1.orf0.gen Protein 4e-44 45
H04402_03445 YP_005679972.1 two-component response regulator AF155139.2.orf0.gene Protein 5e-45 44
H04402_03445 YP_005679972.1 two-component response regulator DQ212986.1.gene4.p01 Protein 3e-42 43
H04402_03445 YP_005679972.1 two-component response regulator AM180355.1.gene1830. Protein 5e-41 43
H04402_03445 YP_005679972.1 two-component response regulator EU250284.1.orf4.gene Protein 2e-40 41
H04402_03445 YP_005679972.1 two-component response regulator NC_009641.5332272.p0 Protein 7e-38 41
H04402_03445 YP_005679972.1 two-component response regulator NC_013450.8614421.p0 Protein 7e-38 41
H04402_03445 YP_005679972.1 two-component response regulator NC_007793.3914279.p0 Protein 7e-38 41
H04402_03445 YP_005679972.1 two-component response regulator NC_002745.1124361.p0 Protein 7e-38 41
H04402_03445 YP_005679972.1 two-component response regulator NC_009782.5559369.p0 Protein 7e-38 41
H04402_03445 YP_005679972.1 two-component response regulator NC_002951.3237708.p0 Protein 7e-38 41
H04402_03445 YP_005679972.1 two-component response regulator NC_003923.1003749.p0 Protein 6e-38 41
H04402_03445 YP_005679972.1 two-component response regulator NC_002758.1121668.p0 Protein 7e-38 41
H04402_03445 YP_005679972.1 two-component response regulator FJ349556.1.orf0.gene Protein 6e-47 41