Gene Information

Name : H04402_00322 (H04402_00322)
Accession : YP_005676891.1
Strain : Clostridium botulinum H04402 065
Genome accession: NC_017299
Putative virulence/resistance : Virulence
Product : ferrichrome transport ATP-binding protein (TC 3.A.1.14.3)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 394984 - 395808 bp
Length : 825 bp
Strand : +
Note : -

DNA sequence : 
ATGAATAGCATAAAAGTGGAAAATCTATCTATTGCTTATGATGAAAGCATAATAGTAGAAAACTTAAATGTAAGCATTCC
TAAAGGGAAAATAACAACTATTATAGGACCTAATGGATGTGGTAAATCAACTATATTAAAAACTATAGGACGTATTATGA
AACCTAAAAATGGCATGATTTATATAAATGGAGAAGATATAAAAAAGTTGTCCACAAAAGAAATTGCAAAAAAAATGGCA
ATTTTGCCTCAGAGCCCTCAATCACCTAGTGGCCTTACAGTAGGTGAACTTGTAGCTTATGGACGCTATCCTCATCAAAG
GGGATTGGGTAGTCTTACATCTGAGGATAAAAAAATTATAGAGTGGGCATTGGAAGCTACAAAAATTTCAGAATTTGAAC
ATAGATCTGTAGATGCTCTTTCTGGTGGACAAAGACAGAGAGTTTGGATAGCTATGGCATTAGCACAACAGACAGATTTA
ATTCTTTTAGACGAGCCAACAACTTATTTAGATTTATCTCATCAATTAGAGGTGTTAGAACTTCTATATGATTTAAATAA
AAAACAAAAGTGCTCTATAGTTATGGTAATACACGATTTAAATCTTGCAGCACGATTTGCAGATTATATGATTGCAATCC
GTAGTGGAAAAGTTATTTCCAAAGGTGTACCAGAAATTGTTATGACGTCATCTGTTTTAAGAGAAACCTTCAATATAGAT
GTGGAGATTGTAAAGGATCCCCGTACACATAGGCCAGTTTGTATTACTTATGATTTAATTAAAGCAGACAATATACAGGA
AGTAAGGAGAGTGAGATACAGTTGA

Protein sequence : 
MNSIKVENLSIAYDESIIVENLNVSIPKGKITTIIGPNGCGKSTILKTIGRIMKPKNGMIYINGEDIKKLSTKEIAKKMA
ILPQSPQSPSGLTVGELVAYGRYPHQRGLGSLTSEDKKIIEWALEATKISEFEHRSVDALSGGQRQRVWIAMALAQQTDL
ILLDEPTTYLDLSHQLEVLELLYDLNKKQKCSIVMVIHDLNLAARFADYMIAIRSGKVISKGVPEIVMTSSVLRETFNID
VEIVKDPRTHRPVCITYDLIKADNIQEVRRVRYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-59 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-59 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-56 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-56 47
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-56 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-56 47
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-54 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-55 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-54 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-54 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-54 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-54 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-55 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H04402_00322 YP_005676891.1 ferrichrome transport ATP-binding protein (TC 3.A.1.14.3) BAC0164 Protein 1e-55 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H04402_00322 YP_005676891.1 ferrichrome transport ATP-binding protein (TC 3.A.1.14.3) VFG0925 Protein 1e-55 44
H04402_00322 YP_005676891.1 ferrichrome transport ATP-binding protein (TC 3.A.1.14.3) VFG1042 Protein 1e-55 42