Gene Information

Name : H04402_03186 (H04402_03186)
Accession : YP_005679717.1
Strain : Clostridium botulinum H04402 065
Genome accession: NC_017299
Putative virulence/resistance : Virulence
Product : UDP-N-acetylglucosamine 4,6-dehydratase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3303143 - 3305008 bp
Length : 1866 bp
Strand : -
Note : -

DNA sequence :
ATGAGAAAAGATAGGGAATTGATTCTTTATGATATATTATTAATAATTTTATCATTATATTTAGCAATATTATTAAGATT
CGATTTTGGTATGGCTTCTATGGCTTCGGAATTTAAAAAATATATGATATTTTTTAAGTTATCAGTAATTCCAGTTATAA
TAATAATCTTATTTTTTAATAAATTATTTAATCTCTATAGTAGTATATGGAAATATGCTTCAGTAGAAGAACTTATGTCT
ATAATTTATTCAGTTTCTATATCTAATTTTATATTTATAATTTATAGTTATTTTATTAACTATAAAGTTTTAGAAAGCAA
TTATTATAGATTTCCATTTACTGTACATATAATATTTTGGATTTTATCCATAGTATCTCTAGGAGGTACAAGATTTATAT
ATAGAGTTATAGAAGATAAGGAATGTAATAAGAACAAATGTAACTGTGATTCTAAAGAAAAGAAGTTACTCATAATAGGG
GCAGGGGATGCAGCGGCTCTTATTATAAAGGAGATAAAAAGAAATAAGGAACTAAATTATAATATAATAGGTCTTATAGA
TGATGATATAGAGAAACTAGGAAAGAGGATAAATAGTATACCTGTTTTAGGTGGAAGAGAAGGTATTATAAAGATATCTA
AAAATAAAAAAATAGATGAAATAATATTAGCTATACCTTCAGCATCATCTTCAACAAAAAGTGAAATAGTATCTATATGT
AAAGAAACTAATTGTAAATTAAAAACTTTACCAAGTATGGATAAGATAATACAAGGTAAGTTTAATATGAGTAAGCTAAG
AGATGTAAGTATTGAAGATTTGCTTGGAAGAGAAGAAGTTAAGTTAGATGATAGCGGAATAAATAAATATATAAAGGATA
AAGTAGTTTTAGTTACTGGTGGAGGGGGATCTATTGGGTCAGAACTTTGCAGACAAATAGTTAAATTTTCACCTAAGAAA
CTTTTAATATTAGATATATATGAAAACAATGCCTATGATGTTCAAATGGAATTAAATTATAAATATCCAGAGCTAGATAA
AGCTGTTATAATAGCTTCCATAAGGGATGAAAAGAGATTAAAAGATATATTTTCATTATATAAACCAGATGTAGTTTTTC
ATGCAGCAGCTCATAAACATGTTCCATTAATGGAAGAAAACCCAGCAGAATCCATTAAAAACAATGTAATAGGTACCTAT
AATTTAATAAAATGTGCCCATGAATTTGGGATTGAGCGTTTTGTACAAATAAGTACAGATAAAGCTGTTAATCCAACCAA
TATAATGGGAGCTACAAAAAGATTTTGTGAAATAATGATTCAAGCTTTTGATAAAATAAGTAAAACTGAATTTGTAGCTG
TTAGATTTGGGAATGTTTTAGGAAGTAATGGATCTGTTATTCCATTATTTAAAAAACAAATATCTCATGGAGGACCTGTC
ACTGTAACCCATCCAGAAATAAATAGATATTTTATGACCATACCAGAAGCAGCTCAATTAGTTATACAAGCAGGTGCTAT
GGCAAAAGGTGGAGAAATATTTGTTTTGGATATGGGAAAACCAGTTAAAATTGTAGATTTAGCTAAAGATTTAATAACCT
TATCTGGGTATAAGCCAGGGGAGGATATTAAAATTGAGTATACAGGATTAAGACCTGGGGAAAAATTATATGAAGAATTA
TTAATGGATGAAATAGCTTTAACATCAACAGGACATAATAAAATATTTGTAGAAAAGCCTATGGAAAATAATACAGACTT
TGTAGAAAAATCCATAGAAGAATTTAAAAAAGTTGTTTATAATGATAAAGAAGAAATATTTGCATTGATAGAAAAGAAGG
TTCCAACATATATAAGAAAAAAATAA

Protein sequence :
MRKDRELILYDILLIILSLYLAILLRFDFGMASMASEFKKYMIFFKLSVIPVIIIILFFNKLFNLYSSIWKYASVEELMS
IIYSVSISNFIFIIYSYFINYKVLESNYYRFPFTVHIIFWILSIVSLGGTRFIYRVIEDKECNKNKCNCDSKEKKLLIIG
AGDAAALIIKEIKRNKELNYNIIGLIDDDIEKLGKRINSIPVLGGREGIIKISKNKKIDEIILAIPSASSSTKSEIVSIC
KETNCKLKTLPSMDKIIQGKFNMSKLRDVSIEDLLGREEVKLDDSGINKYIKDKVVLVTGGGGSIGSELCRQIVKFSPKK
LLILDIYENNAYDVQMELNYKYPELDKAVIIASIRDEKRLKDIFSLYKPDVVFHAAAHKHVPLMEENPAESIKNNVIGTY
NLIKCAHEFGIERFVQISTDKAVNPTNIMGATKRFCEIMIQAFDKISKTEFVAVRFGNVLGSNGSVIPLFKKQISHGGPV
TVTHPEINRYFMTIPEAAQLVIQAGAMAKGGEIFVLDMGKPVKIVDLAKDLITLSGYKPGEDIKIEYTGLRPGEKLYEEL
LMDEIALTSTGHNKIFVEKPMENNTDFVEKSIEEFKKVVYNDKEEIFALIEKKVPTYIRKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 7e-91 47
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-90 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H04402_03186 YP_005679717.1 UDP-N-acetylglucosamine 4,6-dehydratase VFG1300 Protein 3e-88 42