Gene Information

Name : H04402_02160 (H04402_02160)
Accession : YP_005678702.1
Strain : Clostridium botulinum H04402 065
Genome accession: NC_017299
Putative virulence/resistance : Virulence
Product : transport protein SgaT, putative
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2306074 - 2307438 bp
Length : 1365 bp
Strand : -
Note : -

DNA sequence :
ATGTTAGGATTACTTCAATTTTTAAGAGACGTTTTAAAACAACCGGCATTATTAATGGGGATCATGGCATTAGTAGGACT
TGTAGCCTTAAAGAAACCTGGACATAAGGTTCTTACAGGAACTTTAAAACCAATATTAGGCTACTTAATGCTTGGTGCTG
GTGCAGATTTTATAGTCGCAAACTTAGAACCCTTAGGAGGAATGATCCAAACTGGTTTTAACATAACTGGAGTAGTACCA
AATAATGAAGCAATCGTTGCTGTTGCTCAGAAGGTACTAGGGGTAGAAACCATGTCAATTTTAGTAGTTGGACTTTTAAT
AAATCTTGTTATAGCAAGGTTTACTAAATACAAATATGTATTTTTAACTGGTCATCATAGTTTCTTTATGGCATGCCTTT
TATCAGCAGTTTTAGGAACTTCCGGTATGAAGGGAACTGAACTTATATTATTTGGTGGATTCTTACTTGGAGCATGGAGT
GCAATATCACCAGCAATTGGACAAAAATACACATTAAAAGTTACTGATGGCGATGAGATTGCTATGGGTCACTTTGGAAG
CTTAGCATACTATGTTTCAGCTTGGGTTGGTTCAAAAGTAGGCAAGCCTGAAGAAAGTACTGAAAATATTGAAATTCCTG
AAAAATGGGGATTCTTAAGAGATACTACTATTTCTACAGCAATTACAATGATGGTATTTTATATAGTAGCAGCTGTAGCC
GCTGGTCCTGAATATGTATCTAAATTATCAGATGGAATGTCACCTATATTATTTGCTATAATGTCATCATTAAAATTTGC
AGTTGGTGTTACTATTGTTTACAATGGTGTAAGAATGATTCTTGGAGATCTTATACCAGCATTCCAAGGTATTGCAACAA
AAATTATACCGGATGCTATACCAGCAGTTGATTGTGCCGTATTTTTCCCTTATGCACCTACAGCAGTTATAATCGGTTTT
GTAAGCTCATTCATAGGTGGAATTATAGGTATGGTTTTACTAGGAGTAGCTGGAGGAGTACTTATAATACCAGGACTTGT
ACCTCACTTCTTCTGTGGTTCTACAGCAGGTATATTTGGAAATGCAACAGGAGGAAAAAAGGGAGCTGTAATTGGAAGTT
TTGTAAACGGACTTTTGATAACCTTTGCCCCAGCATTACTTCTTCCAGTACTTAGTACCCTTGGATTCAAAAACACAACC
TTTGGTGATTTTGATTTCGGTGTTCTTGGTATAATTATTGGAAAAACATCAAATCTAGCAGGAAAAACAGGAATAATAAT
TATTGCTATGTTGATGTTAGTAGCTCTTATAGTTCCAAACTTTATTAAGACTAAATCAAAAGCATTAAATAATATAGAAG
AATAA

Protein sequence :
MLGLLQFLRDVLKQPALLMGIMALVGLVALKKPGHKVLTGTLKPILGYLMLGAGADFIVANLEPLGGMIQTGFNITGVVP
NNEAIVAVAQKVLGVETMSILVVGLLINLVIARFTKYKYVFLTGHHSFFMACLLSAVLGTSGMKGTELILFGGFLLGAWS
AISPAIGQKYTLKVTDGDEIAMGHFGSLAYYVSAWVGSKVGKPEESTENIEIPEKWGFLRDTTISTAITMMVFYIVAAVA
AGPEYVSKLSDGMSPILFAIMSSLKFAVGVTIVYNGVRMILGDLIPAFQGIATKIIPDAIPAVDCAVFFPYAPTAVIIGF
VSSFIGGIIGMVLLGVAGGVLIIPGLVPHFFCGSTAGIFGNATGGKKGAVIGSFVNGLLITFAPALLLPVLSTLGFKNTT
FGDFDFGVLGIIIGKTSNLAGKTGIIIIAMLMLVALIVPNFIKTKSKALNNIEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vpeC ADD91725.1 putative PTS system-specific IIC component VpeC Virulence PAI-I AL862 Protein 2e-82 50
ORF8 AAK27335.1 unknown Not tested PAI-I AL862 Protein 3e-82 50
unnamed CAC39291.1 hypothetical protein Not tested LPA Protein 2e-82 50