Gene Information

Name : H04402_01654 (H04402_01654)
Accession : YP_005678202.1
Strain : Clostridium botulinum H04402 065
Genome accession: NC_017299
Putative virulence/resistance : Resistance
Product : response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1773193 - 1773852 bp
Length : 660 bp
Strand : +
Note : -

DNA sequence :
ATGTCGAAAATACTTGTAATTGATGATGAAGAAGATATTTTAGCCCTTGTTAAAAATGTTCTTTCCAAGGATAATCACTT
AGTAACTACAGTAAAGAAAGCAAAAGATATTCCGTTAAATGATTTTGTAAAATTTGATCTGATTTTACTAGATGTAATGA
TGCCTGATATTGATGGCTTCACTTTGTGTAAGGAAATTAGAGAGATGGTAGACTGTCCAATTCTTTTTTTAACAGCAAAA
ACTATGGAAAGCGACATTATGTTTGGATTAGGAATTGGTGGAGATGATTATATAACGAAACCTTTTGGAGTAGGAGAACT
AAGAGCTAGAGTAAATGCTCATCTACGCAGGGAACATCGTGAAAAACGTCATATTTTTGTAGCTTCAGATATTATATTTA
ATCTATCCAGTAAGGAAATTAAAATAGGCGATGTAAAGGTGGCCTTCACAAAGGGAGAATATGCTATATGTGAATACCTT
GCAAGAAATTCAGGACAGGTGTTTTCTAAAGAGCAAATATATGAAGCGGTTTATGGGTATGATGGAGAAAGTGATAGCTC
TGCTATTACAGAGCATATTAAAAATATTAGAGCTAAGTTAAAAGTTTTTGATATATCACCAATAGAAACGGTTTGGGGGA
TTGGTTACAAATGGGTATAA

Protein sequence :
MSKILVIDDEEDILALVKNVLSKDNHLVTTVKKAKDIPLNDFVKFDLILLDVMMPDIDGFTLCKEIREMVDCPILFLTAK
TMESDIMFGLGIGGDDYITKPFGVGELRARVNAHLRREHREKRHIFVASDIIFNLSSKEIKIGDVKVAFTKGEYAICEYL
ARNSGQVFSKEQIYEAVYGYDGESDSSAITEHIKNIRAKLKVFDISPIETVWGIGYKWV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0907 YP_001198273.1 NisR Not tested 89K Protein 5e-40 47
SSU98_0912 YP_001200470.1 NisR Not tested 89K Protein 1e-25 47
nisR2 YP_006309922.1 NisR Not tested FWisland_1 Protein 2e-39 44
nisR YP_006309898.1 NisR Not tested FWisland_1 Protein 8e-44 43