Gene Information

Name : hemC (CBF_0979)
Accession : YP_005673946.1
Strain : Clostridium botulinum 230613
Genome accession: NC_017297
Putative virulence/resistance : Unknown
Product : hydroxymethylbilane synthase
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.61
Position : 1054646 - 1055518 bp
Length : 873 bp
Strand : +
Note : identified by match to protein family HMM PF01379; match to protein family HMM PF03900; match to protein family HMM TIGR00212

DNA sequence :
TTGAATTTTATAATAGCCACAAGAAGAAGTAAGCTTGCTCAGGTGCAAACAGAAATAATAATAGATTTATTAAATAAAAA
ACATGATATAGAATGTGAAAAATTATTAATAGAAACTGTAGGAGATAAAATATTAGAAGTATCCTTAGATAAAATAGGTG
GAAAAGGACTATTCGTTAAAGACATAGAAGTAGCTATGCTGGAGCAAAGGGCAGATGCAGCAGTGCATAGTATGAAGGAT
GTGCCCTATGAAATGCCAAAAGGTTTTGAGATAATAGCTATTCCAAAGCGAGAAGATGTAAGAGATGCCTTTATATCCTT
AGACAATATAAAATTTAAGGATTTAAGAAAGGGAGCTAAAATTGGTACAAGTAGTAGGAGAAGGGCAGCCCAATTAAAGC
TTCTACGCCCAGATTTAGATATTGTTCCTATAAGAGGAAATGTTCAAACTAGGATAGAGAAAATAAAAAAAGAAAATCTA
GATGGAATAATATTAGCAGTAGCAGGCCTTAAAAGGGTAAATTTAGAACATCTAATTACAGATTATTTTGATACAAAAGA
AATGGTACCCGCAATTGGACAAGGTGCCTTAGGTATAGAAGTTATGGAGGAGCATCCTAAAAAGGAGTTATTTAAAGATT
TAGATCATTATAATTCAAAAATATGTGTTTTGGCAGAAAGAGCTTTTATGAGGGAACTAGATGGAGATTGCCATTCAACT
ATAGGAGCCTATGCATCTATAAAAGATAATATAATGCATATAATAGGCATATTTGAAAGAAAAAATAAAATTATTAAAAA
AGAAATTACAGGAACAAAAGATCAGTATGAAAAACTAGGCATAGCCTTAGCAGAGCATATACTGAAGGACTAA

Protein sequence :
MNFIIATRRSKLAQVQTEIIIDLLNKKHDIECEKLLIETVGDKILEVSLDKIGGKGLFVKDIEVAMLEQRADAAVHSMKD
VPYEMPKGFEIIAIPKREDVRDAFISLDNIKFKDLRKGAKIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENL
DGIILAVAGLKRVNLEHLITDYFDTKEMVPAIGQGALGIEVMEEHPKKELFKDLDHYNSKICVLAERAFMRELDGDCHST
IGAYASIKDNIMHIIGIFERKNKIIKKEITGTKDQYEKLGIALAEHILKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 9e-48 42
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 9e-48 42