Gene Information

Name : CBF_0528 (CBF_0528)
Accession : YP_005673509.1
Strain : Clostridium botulinum 230613
Genome accession: NC_017297
Putative virulence/resistance : Resistance
Product : putative cadmium resistance transcriptional regulator CadC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 577459 - 577824 bp
Length : 366 bp
Strand : +
Note : identified by match to protein family HMM PF01022

DNA sequence :
ATGGATAAAGAAAAACAGATAGATACTTGCACATGCAATGTAATTCATCATGATGTAGTAGATAAAGTTAAAGATAATAT
GATAGAAGAAGATAAAGCACAGGATTTAGGAGATTTTTTTAAGGTTCTATCAGAACCGACTAGAATAAAAATTTTATATG
CATTATCATCATCAGAAATGTGCGTATGTGATATTTCAAATCTTCTTAATATGACACAATCAGCGGTGTCTCATCAACTT
AAAGTTTTAAGAACAGCTAGACTTATAAAATTTAGAAAAGAGGGTAAAGTTGTTTATTATTCATTAGATGACTCACATGT
AGAGAATGTGTTTAAGCAAGGACTAGAACACATAATGCATAGATAA

Protein sequence :
MDKEKQIDTCTCNVIHHDVVDKVKDNMIEEDKAQDLGDFFKVLSEPTRIKILYALSSSEMCVCDISNLLNMTQSAVSHQL
KVLRTARLIKFRKEGKVVYYSLDDSHVENVFKQGLEHIMHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47608.1 cadmium resistance protein C Not tested Type-III SCCmec Protein 7e-17 42
cadC BAC57488.1 Cadmium efflux system accessory protein homolog, cadmium resistance protein C Not tested Type-IIIinv SCCmec Protein 7e-17 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CBF_0528 YP_005673509.1 putative cadmium resistance transcriptional regulator CadC BAC0366 Protein 1e-17 43