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Name : dnaB (CBF_3814) Accession : YP_005676530.1 Strain : Clostridium botulinum 230613 Genome accession: NC_017297 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : - COG ID : - EC number : 3.6.1.- Position : 3968805 - 3970142 bp Length : 1338 bp Strand : - Note : identified by match to protein family HMM PF00772; match to protein family HMM PF03796; match to protein family HMM TIGR00665 DNA sequence : ATGGATGCACCCATAAAAAGTATGCCGCAGAGTATAGATGCAGAGCAAAATGTATTAGGGGCAATGATTATAGATAAAAC TTCCATAGCAGAGGCTGTGGAAGTTTTAAAAAGTGAAGATTTTTATAAAGATTCTCATAAAATTATATTTAGTGGAATTA TAGAGCTTTATCAAAAGGATATAGCAGTAGATATGCTAACTCTTACGGAAAATCTTAAGTCACGAGATAAACTAGAGGCA GTAGGTGGGGTTACTTATATAACAGAGCTTTGTAACTCTATAGTTTCTACAGCTAATATTCAGTCTTATATAGATATAAT AAAGGATAAATCTACATTAAGAAGGCTTATAAAGTCATCTACTGAAATAATAGAGAACTGTTATAACAGACAGGATAATG TAGAAGAAATAATAGATTCTGCAGAGAAAAAAATATTTCACATATCCAACCAAAATACTACAACTGATTTTGAACCATTA AGTAATGTTTTGGAAAGAGGATTTATTCAAATTGAAAACTTATTTAAAAATAAAGGTGAAACTACAGGGGTTGCATCTGG TTTTAGAGAACTAGACGCTAAAACCTCAGGTTTTCAAAAGTCTGATATGATATTAATAGCAGCAAGACCATCAATGGGTA AAACTACATTTGCTCTAAACATAGCAGAATATGCAGCTCTTAGAGAGGGAAAAAGTGTAGCAATCTTTTCCCTAGAAATG TCAAAAGAGCAACTTTCTTATAAATTGCTTTGTTCCCAAGCTAATATTGATATGTTGAGGCTTAGAACTGGTAACTTAGA GGATAAAGACTGGGAGAATATAGCTAGGGTTTCAGGGCCTTTAGCAGCAGCAAAGATATTTATAGATGATACTGCAGGTA TGTCTGTAATGGAAATGCGTTCTAAATGTAGGAGATTAAAAATAGAACATGGAATAGATATGGTTTTAATAGATTATCTT CAGCTTATGAGTGGAGGTAAAGGGTCTACTGAAAGTAGACAACAAGAAGTCTCAGAAATATCTAGATCTATAAAAGCCTT AGCTAAAGAAATGGATTGTCCAGTTATAGCCTTATCTCAATTATCTCGTGCTCCGGAGGCTAGATCGGATCATAGACCAA TGCTTTCAGATCTTAGAGAATCTGGATCTATAGAACAGGATGCTGACGTAGTTATGTTTTTATATAGAGATGAATACTAT GACAAAGAAACAGAAGATAAAAACATGGCAGAATGCATTATAGCCAAGCAAAGAAATGGTCCTACGGGGACAGTTAAAAT GGCATGGCTTGGACAATACAGTAAATTTGGTAATTTAGATGTGATACATCAAGAATAA Protein sequence : MDAPIKSMPQSIDAEQNVLGAMIIDKTSIAEAVEVLKSEDFYKDSHKIIFSGIIELYQKDIAVDMLTLTENLKSRDKLEA VGGVTYITELCNSIVSTANIQSYIDIIKDKSTLRRLIKSSTEIIENCYNRQDNVEEIIDSAEKKIFHISNQNTTTDFEPL SNVLERGFIQIENLFKNKGETTGVASGFRELDAKTSGFQKSDMILIAARPSMGKTTFALNIAEYAALREGKSVAIFSLEM SKEQLSYKLLCSQANIDMLRLRTGNLEDKDWENIARVSGPLAAAKIFIDDTAGMSVMEMRSKCRRLKIEHGIDMVLIDYL QLMSGGKGSTESRQQEVSEISRSIKALAKEMDCPVIALSQLSRAPEARSDHRPMLSDLRESGSIEQDADVVMFLYRDEYY DKETEDKNMAECIIAKQRNGPTGTVKMAWLGQYSKFGNLDVIHQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 8e-81 | 42 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-80 | 42 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-72 | 42 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-72 | 42 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 6e-75 | 41 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 9e-84 | 41 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 4e-79 | 41 |
