Gene Information

Name : CBF_2842 (CBF_2842)
Accession : YP_005675666.1
Strain : Clostridium botulinum 230613
Genome accession: NC_017297
Putative virulence/resistance : Unknown
Product : pyridoxal 5'-phosphate synthase, synthase subunit Pdx1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2987558 - 2988430 bp
Length : 873 bp
Strand : -
Note : identified by match to protein family HMM PF01680; match to protein family HMM TIGR00343

DNA sequence :
ATGGAAAAGAAATACGAATTAAACAAAAATTTAGCTCAAATGATTAAGAATGGAGTCATAATGGATGTTGTGAATCCAGA
GCAAGCAAAAATTGCAGAAGAAGCTGGGGCTATAGCTGTTATGGCATTAGAAAGGGTTCCATCAGACATTAGAAAACAAG
GGGGAGTAGCTAGAACTTCTGATCCTAAGATGATAAAAGAAATAATAAATGCAGTTTCAATACCGGTTATGGCAAAGGTT
AGAATAGGTCATTTTGTAGAAGCTCAAATATTAGAAGCTATAGGAGTAGATTGTATAGATGAGAGTGAAGTTTTAACGCC
AGCAGATGATTTGTTCCATATAAATAAAAAAGATTTTAAGGTTCCTTTCGTTTGTGGTGCAAGAAATTTGGGAGAGGCTT
TAAGAAGAATAGGAGAAGGAGCTTCTATGATAAGAACTAAAGGGGAAGCAGGTACAGGAAATGTAGTAGAAGCGGTAAGA
CATATGAGAACCATAAGCTCAGAAATGAGAAAACTGCAACTTACACCAAAAGAAGAGTTAATGACTGTAGCTAAAGAAAT
GGGAGCACCATTTAACTTAATAGAATATGTGGCAGAAAAGGGTAAGCTTCCAGTAATAAATTTTGCAGCGGGTGGCATAG
CAACACCAGCAGATGCAGCTTTAATGATGCAGTTAGGGTGTGATGGAATATTTGTAGGCTCTGGAATATTTAAATCAGAT
AGTCCAGAAAAAAGAGCAAAAGCTATAGTTAAGGCAACAACTTATTTTAAGGATCCAGATGTTTTAGCTAAGGTTTCAGA
GAACTTAGGAGGAGCAATGTCAGGTTTAGAAATTAGTAAGCTAGAAACAGAATTTGCTGAAAGAGGCTGGTAA

Protein sequence :
MEKKYELNKNLAQMIKNGVIMDVVNPEQAKIAEEAGAIAVMALERVPSDIRKQGGVARTSDPKMIKEIINAVSIPVMAKV
RIGHFVEAQILEAIGVDCIDESEVLTPADDLFHINKKDFKVPFVCGARNLGEALRRIGEGASMIRTKGEAGTGNVVEAVR
HMRTISSEMRKLQLTPKEELMTVAKEMGAPFNLIEYVAEKGKLPVINFAAGGIATPADAALMMQLGCDGIFVGSGIFKSD
SPEKRAKAIVKATTYFKDPDVLAKVSENLGGAMSGLEISKLETEFAERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-80 66
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-80 66
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-80 65