Gene Information

Name : CBF_2181 (CBF_2181)
Accession : YP_005675051.1
Strain : Clostridium botulinum 230613
Genome accession: NC_017297
Putative virulence/resistance : Virulence
Product : putative PTS system, L-ascorbate family, IIC component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2346725 - 2348089 bp
Length : 1365 bp
Strand : -
Note : identified by match to protein family HMM PF04215

DNA sequence :
ATGTTAGGATTACTTCAATTTTTAAGAGACGTTTTAAAACAACCGGCATTATTAATGGGTATTATGGCATTAGTAGGACT
TGTAGCCTTAAAGAAACCTGGACATAAGGTTCTTACAGGAACTTTAAAACCAATATTAGGTTACTTGATGCTTGGTGCCG
GTGCAGATTTTATAGTAGCAAACTTAGAGCCCCTAGGAGGAATGATCCAAACTGGCTTTAACATAACTGGGGTAGTACCA
AATAATGAAGCAATCGTTGCTGTTGCCCAAAAGGTACTAGGGGTAGAAACCATGTCAATTTTAGTAGTTGGACTTTTGAT
AAATCTTGTTATAGCAAGGTTTACTAAATACAAATATGTATTTTTAACTGGTCATCATAGTTTCTTTATGGCATGTCTTT
TATCAGCAGTTTTAGGAACTTCCGGCATGAAAGGGACTGAACTTATATTATTTGGTGGATTTTTACTTGGAGCATGGAGT
GCAATATCACCAGCAATTGGTCAAAAATACACATTAAAGGTTACTGATGGCGATGAAATCGCTATGGGTCATTTTGGAAG
CTTAGCATACTATGTTTCAGCTTGGGTTGGTTCAAAAGTAGGCAAGCCTGAAGAAAGCACTGAAAACATTGAAATTCCTG
AAAAGTGGGGATTTTTAAGAGATACAACTATTTCTACAGCAATTACAATGATGGTATTTTATATAGTAGCAGCAGTAGCC
GCTGGTCCTGAATATGTATCTAAATTATCAGATGGAATGTCACCTATATTATTTGCTATAATGTCATCATTAAAATTTGC
AGTTGGTGTTACTATTGTTTACAATGGTGTAAGAATGATTCTTGGAGATCTTATACCAGCATTCCAAGGTATTGCAACAA
AAATTATACCAGATGCTATACCAGCAGTTGATTGTGCCGTATTTTTCCCTTATGCACCTACAGCAGTTATAATCGGTTTT
GTAAGCTCATTCATAGGTGGAATTATAGGTATGGTTTTACTTGGAGTAGCTGGAGGAGTGCTTATAATACCAGGACTTGT
ACCTCACTTCTTCTGTGGTTCTACAGCAGGTATATTTGGAAATGCAACAGGAGGAAAAAAGGGAGCTGTAATTGGAAGTT
TTGTAAACGGACTTTTGATAACCTTTGCACCAGCATTACTTCTTCCAGTACTTAGTACCCTTGGATTCAAAAACACAACC
TTTGGTGATTTTGATTTCGGTGTTCTTGGTATAATTATTGGAAAAACATCAAATCTAGCAGGAAAAACAGGAATAATAAT
TATTGCTATGTTGATGTTAGTAGCTCTTATAGTTCCAAACTTTATTAAAACTAAATCAAAAGCATTAAATAATATAGAAG
AATAA

Protein sequence :
MLGLLQFLRDVLKQPALLMGIMALVGLVALKKPGHKVLTGTLKPILGYLMLGAGADFIVANLEPLGGMIQTGFNITGVVP
NNEAIVAVAQKVLGVETMSILVVGLLINLVIARFTKYKYVFLTGHHSFFMACLLSAVLGTSGMKGTELILFGGFLLGAWS
AISPAIGQKYTLKVTDGDEIAMGHFGSLAYYVSAWVGSKVGKPEESTENIEIPEKWGFLRDTTISTAITMMVFYIVAAVA
AGPEYVSKLSDGMSPILFAIMSSLKFAVGVTIVYNGVRMILGDLIPAFQGIATKIIPDAIPAVDCAVFFPYAPTAVIIGF
VSSFIGGIIGMVLLGVAGGVLIIPGLVPHFFCGSTAGIFGNATGGKKGAVIGSFVNGLLITFAPALLLPVLSTLGFKNTT
FGDFDFGVLGIIIGKTSNLAGKTGIIIIAMLMLVALIVPNFIKTKSKALNNIEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vpeC ADD91725.1 putative PTS system-specific IIC component VpeC Virulence PAI-I AL862 Protein 2e-82 50
ORF8 AAK27335.1 unknown Not tested PAI-I AL862 Protein 3e-82 50
unnamed CAC39291.1 hypothetical protein Not tested LPA Protein 2e-82 50