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Name : serS-1 (CBF_0021) Accession : YP_005673070.1 Strain : Clostridium botulinum 230613 Genome accession: NC_017297 Putative virulence/resistance : Unknown Product : serine--tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 22333 - 23613 bp Length : 1281 bp Strand : + Note : identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414 DNA sequence : ATGTTAGATTTAAAAAGAATAAGAAATAATTCAAATGAAATAAAAGAAGCATTAAACAATAGAGGAGAAAAGTTTGATGT AACTGTAATTGATGAAGTTTTAAAATTAGATGAAGAAAGAAGAAATATTTTAGCTAAAGTTGAGGTTTTAAAAAGTAAGA GAAATCAAGTTTCTTCTGAAGTTCCTAAATTAAAAAAAGAAGGAAAAGATGTATCTAATATAGTAGCTGAAATGAAGAAT TTATCAGAAGAGATAAAAGGATTTGATGCTACTTTAGCTAAAATAGATGAAAAAATACAATATATAATGCTTAGAATACC TAATATACCAAACCCACAAGTTCCAGATGGAGAAACAGATGAGGATAATATAGAAATAAGAAATTGGCTAGAACCAACAA AATTTTATTTTGAACCTAAAGCACATTGGGATATAGGAACAAATTTAAATATTCTTGATTTTGAAAGAGCTGGAAAAGTA ACAGGATCAAGATTTACTTTTTATAAAGGATTAGGGGCTAGATTAGAAAGAGCAGTAATATCTTATTTTTTAGATACTCA TACAGAAAAACATGGTTATACTGAAATATTACCACCTTATATGGTAAATAGAACAAGTATGATAGGAACAGGACAATTAC CTAAATTTGAAGAAGACGCTTTTAAAATTTCAGAGGATGATTACTTTTTAATACCAACTGCAGAAGTTCCTGTAACTAAT TTATATAGAGATGAAATCTTAAAAGGTGATGAATTACCATTAAAACATGTAGCTTATAGTGCTTGTTTTAGATCAGAAGC AGGTTCAGCAGGTAGAGATACAAGAGGTCTTGTTAGACAACACCAATTTAATAAAGTAGAGCTTGTTAAATTTACAAAAC CAGAACAGTCTTATGAAGAATTAGAAAAATTAACTAATGATGCTGAAACAGTATTAAAAGAGTTAGGTATTCCATATAGA GTTGTAAGAATATGCAAAGGTGATTTAGGATTTACAGCTGCATTAAAATATGATTTAGAAGTTTGGATGCCAAGTTACAA TAGATATGTTGAAATATCAAGCTGTAGTAACTTTGAAGACTTTCAAGCAAGACGTGCTAATATAAGATACAAAGAAGATG CAAAAGCAAAACCACAATATGTTCATACATTAAATGGATCAGGAGTTGCTATTGGAAGAACTGTTGCAGCTATACTTGAA AACTATCAAAGTGAAGATGGATCAGTTACAATACCAGAAGTGTTAAGACCTTATATGGGAGGAAGAGAAGTAATAAAATA A Protein sequence : MLDLKRIRNNSNEIKEALNNRGEKFDVTVIDEVLKLDEERRNILAKVEVLKSKRNQVSSEVPKLKKEGKDVSNIVAEMKN LSEEIKGFDATLAKIDEKIQYIMLRIPNIPNPQVPDGETDEDNIEIRNWLEPTKFYFEPKAHWDIGTNLNILDFERAGKV TGSRFTFYKGLGARLERAVISYFLDTHTEKHGYTEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDDYFLIPTAEVPVTN LYRDEILKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFTKPEQSYEELEKLTNDAETVLKELGIPYR VVRICKGDLGFTAALKYDLEVWMPSYNRYVEISSCSNFEDFQARRANIRYKEDAKAKPQYVHTLNGSGVAIGRTVAAILE NYQSEDGSVTIPEVLRPYMGGREVIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-127 | 61 |
