Gene Information

Name : CBF_0208 (CBF_0208)
Accession : YP_005673215.1
Strain : Clostridium botulinum 230613
Genome accession: NC_017297
Putative virulence/resistance : Unknown
Product : RNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 208138 - 210294 bp
Length : 2157 bp
Strand : +
Note : identified by match to protein family HMM PF00575

DNA sequence :
ATGAACAATATAAACAGTATTTTATCAAAAGAACTTAACATATCCATTAAATATATAGATGCAGTTATAGATTTATTAGA
TCAGGGAAATACAGTACCTTTTATAGCAAGATATAGAAAAGAAGTAACAGGAGGTATGAGTGACGAAACGCTTAGAGAGC
TCTTTGAAAGGCTTACGTATTTAAGAAATTTAAGTTCCAAGAAAGAGGATGTTATAAGACTCATAGAGGAGCAAGGCAAA
CTTACAGAAGAGCTTAAAACATCTATAATTAATTGTAAAACTGTTACAGAAGTAGAGGATTTATATAGACCTTATAGACC
AAAAAGAAGGACAAGAGCTACTATAGCAGAAGAAAAAGGATTAAAGCCTTTAGCAGAAATAATATTAGAAGGTAATTTTA
AAGAAGATATAAAAGTATATGCTAGTGAATTCATAAATGAAGAAAAAGAAGTAAAGACTATCGAAGAAGCTCTTCAGGGT
GCTATGGATATAATAAGCGAAGTTATATCTGATGAAGCAGAATACAGAAAATGGATAAGAAATTTTGTTTTTAATGAAGG
AGTAATAGAAACTAAAGGTGAAAGCATGGAACCTACTCCTTACGAAATGTATTATGATTATAAAGAAAATGTAAAAAATA
TTCCTCCTCATCGAATACTAGCTATAAATAGAGGAGAAAAAGAAAAAATATTAACAGCAAAAGTTACTTGTAATGAAGAT
AAAATAATAGATTATTTAAAAAGTAGATCATTAAAAGGAAATAAGGAAACGGATGTATATATAGAGGAGTCTGTTAAAGA
TTCTTTAAAAAGATTAATATATCCATCCATAGAAAGAGAGATAAGATCAGAGTTAACAGAAAAAGGTGAAGAAGGGGCAA
TAAAAATATTTAAAGAGAATTTAAAGGCTCTTTTGATGCAAGCACCTATAAAGGATAAAGTAGTTTTAGGATATGACCCA
GGGTTTAGAACCGGATGTAAGATAGCAGTATTAGATGAAACAGGAAAATTATTAGATACAGCTACAGTTTATGCTACAGC
ACCACAAAATGATGTAGAAGGGTCTATAAAAGTATTAAAAAAATTAATATACAAATATGATGTTGATGTAATATCTTTAG
GAAATGGAACAGCTAGTAGAGAATCAGAAGAGGTTATATCAAAAATGCTTAAAGAAATAAAAGAAGAAAAAGGCAAAGAT
ATATATTATGTTATAGTATCTGAAGCAGGAGCCTCTGTTTATTCTGCGTCAAAATTAGCTACAGAAGAATATCCAGATAT
AAATGTTTCTCTAAGAGGGGCTATATCTATAGGTAGAAGACTTCAAGATCCTCTAGCAGAACTTGTAAAAATAGATCCTA
AGTCTATAGGGGTAGGACAATATCAACACGATGTATCTCAAAAAAAATTAGATGAATCATTAAAAGGTGTGGTAGAAGAT
TGTGTTAATGCGGTAGGAGTAGACTTAAATACTGCAACACCATCACTTTTATCTTATATTTCAGGCATTAATAGCTCTAT
AGCTAAAAATATAGTAGCTTATAGAGAGGAAATAGGGAAATTTAAAAATAGAAAAGAATTATTAAAAGTAAAAAGGTTAG
GACAAAAAGCCTTTGAGCAATGTGCAGGTTTTCTTAGAGTCATGGAAAGTAAAGAACCTTTAGATAATACAGGAGTCCAT
CCAGAGTCCTATGAGGGAACAAAGAAATTTTTAAGCTTGTTACAATATGATATGAAGGATGTAAAAAATAATAAATTACA
GGATATAGATGCTAGAGTTAATAATATAGGTCTAGATGATATATGTAATAAAATAGATATAGGGAAACTTACACTATTAG
ATATTATAAAAGAAATAAAAAAACCAGGAAGAGATCCAAGAGAAGATTTACCTAAACCTATATTAAAGACAGGGATTGTT
GATATAACTCAATTAAAGCCAGATATGGTTTTAATGGGCACTGTTAGGAATGTAGCTGATTTTGGAGCCTTTGTAGATAT
AGGAGTTCATCAAGATGGCTTAGTACATATAAGTCAACTTTCAGATAGCTTTGTAAAACATCCTTTAGATATAGTAAAAG
TAGGAGATATAGTAGAAGTTAGAATATTAGAAGTAGATAAAAAGAGAAACAGAATTTCTTTAAGCATGAAAAAATAA

Protein sequence :
MNNINSILSKELNISIKYIDAVIDLLDQGNTVPFIARYRKEVTGGMSDETLRELFERLTYLRNLSSKKEDVIRLIEEQGK
LTEELKTSIINCKTVTEVEDLYRPYRPKRRTRATIAEEKGLKPLAEIILEGNFKEDIKVYASEFINEEKEVKTIEEALQG
AMDIISEVISDEAEYRKWIRNFVFNEGVIETKGESMEPTPYEMYYDYKENVKNIPPHRILAINRGEKEKILTAKVTCNED
KIIDYLKSRSLKGNKETDVYIEESVKDSLKRLIYPSIEREIRSELTEKGEEGAIKIFKENLKALLMQAPIKDKVVLGYDP
GFRTGCKIAVLDETGKLLDTATVYATAPQNDVEGSIKVLKKLIYKYDVDVISLGNGTASRESEEVISKMLKEIKEEKGKD
IYYVIVSEAGASVYSASKLATEEYPDINVSLRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLDESLKGVVED
CVNAVGVDLNTATPSLLSYISGINSSIAKNIVAYREEIGKFKNRKELLKVKRLGQKAFEQCAGFLRVMESKEPLDNTGVH
PESYEGTKKFLSLLQYDMKDVKNNKLQDIDARVNNIGLDDICNKIDIGKLTLLDIIKEIKKPGRDPREDLPKPILKTGIV
DITQLKPDMVLMGTVRNVADFGAFVDIGVHQDGLVHISQLSDSFVKHPLDIVKVGDIVEVRILEVDKKRNRISLSMKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 2e-153 47