|
Name : CBF_1666 (CBF_1666) Accession : YP_005674584.1 Strain : Clostridium botulinum 230613 Genome accession: NC_017297 Putative virulence/resistance : Unknown Product : glycosyl hydrolase family protein Function : - COG functional category : - COG ID : - EC number : - Position : 1786859 - 1788523 bp Length : 1665 bp Strand : + Note : identified by match to protein family HMM PF00128 DNA sequence : ATGAATAAGACATGGTGGAAAGAAGCTGTTGCATATCAAATATATCCAAGAAGTTTTAAGGATTCAAATGATGATGGTAT AGGAGATATAGAGGGTATAATTTCAAAATTAGATTATTTAAAAGATTTAGGTATAGATATAATTTGGATTTGTCCTATGT ATAAGTCTCCAAATGATGACAACGGTTACGATATAAGCGATTATAAAGCTATAATGGACGAATTTGGAACTATGGAGGAT TTTGATAAGTTACTACAAAAGGCCCATGAAAAAGGTATGAAGCTTATAATAGATTTAGTTATAAATCATACCAGTGATGA GCATAAATGGTTCATTGAATCAAGATCTTCTAAAGATAATCCAAAACGTGATTTTTATATATGGCGTGATGGTAAAGATG GAAAGGAACCTAACAATTGGGAAAGTATATTTAAAGGTTCTGCCTGGGAATATGACTATAATACAGAACAATATTTTCTT CACTTATTTAGTAAAAAACAACCAGATTTAAATTGGGAAAATGAAAATGTTAGAAAAGAATTATATAAAATGATTAACTG GTGGTTAGATAAGGGAATTGATGGATTTAGAGTAGATGCTATAAGTCATATAAAAAAAGAAAAGGGATTAAAAGACATAC CTAATCCAAAAAATTTAGATTATGTTCCTTCTTTTGAAAAACATATGAATGTAGAAGGAATTCAAAAATATCTTAAAGAA TTAAAGGAAAATACCTTTGATAAATATGACATAATAACTGTAGGAGAAGCCAATGGAGTAAATATAAGTGAAGCTCCTCA ATGGGTAGGAGAAAAAGATGGCAAATTTAATATGATATTTCAGTTTGAACATCTAGATCTTTGGGATGTAGATCGTAAAG AACAGTCTACAATAAAAAAATTAAAAGAAGTATTAAGCAAATGGCAGGAAGGTTTAGAAGGAGTTGGATGGAATGCTTTG TTTATAGAAAATCATGATATTCAAAGGGTAGTCTCAACTTTAGGAGATGATAAAAACTTTTGGGAAGAAAGTTCAAAAGC CTTAGCTCTTATATATTTTATGCAAAAGGGGACTCCATTTATATATCAAGGGCAAGAAATAGGAATGACTAATGTTAAAT TTGAAGGTATTGAAGATTATAATGATATAAAAACTATAAATATTTATAAAGAAAAAATAAAAAAAGGTATACCAAAAGAT CAAGCCCTCAAATATGTATGGGAAACTTCAAGAGATAACTCAAGAACACCAATGCAATGGGATACCACAGAAAATGCTGG ATTTTCAAAAGAAAAACCTTGGATGAAAGTTAATCCGAACTATGTAGATATAAACGCTAGGGAACAAGAAAATAACCTAA ATTCTATTTTGAACTTTTATAAAAAAATTATAAGAGTAAAGAAAGAAAATGAAGTACTTATATATGGAAAATATAATTTG ATTTTAGCGCATCATGAACAAATATATGCTTACACAAGAACTTTAGGAAATGAAAAATTTATAGTAATTGCTAATTTAAC AAATAAGGAAGCTAAATATACTTATAAAAGAGAAAAACTAAATTATAAAGGATTGATAATTTCAAACTATTCAATAGAGA AACACGAGGATATAACAGAAATATTATTAAAGCCTTTTGAAGCGAGACTTTATAAAATAGTTTGA Protein sequence : MNKTWWKEAVAYQIYPRSFKDSNDDGIGDIEGIISKLDYLKDLGIDIIWICPMYKSPNDDNGYDISDYKAIMDEFGTMED FDKLLQKAHEKGMKLIIDLVINHTSDEHKWFIESRSSKDNPKRDFYIWRDGKDGKEPNNWESIFKGSAWEYDYNTEQYFL HLFSKKQPDLNWENENVRKELYKMINWWLDKGIDGFRVDAISHIKKEKGLKDIPNPKNLDYVPSFEKHMNVEGIQKYLKE LKENTFDKYDIITVGEANGVNISEAPQWVGEKDGKFNMIFQFEHLDLWDVDRKEQSTIKKLKEVLSKWQEGLEGVGWNAL FIENHDIQRVVSTLGDDKNFWEESSKALALIYFMQKGTPFIYQGQEIGMTNVKFEGIEDYNDIKTINIYKEKIKKGIPKD QALKYVWETSRDNSRTPMQWDTTENAGFSKEKPWMKVNPNYVDINAREQENNLNSILNFYKKIIRVKKENEVLIYGKYNL ILAHHEQIYAYTRTLGNEKFIVIANLTNKEAKYTYKREKLNYKGLIISNYSIEKHEDITEILLKPFEARLYKIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 5e-126 | 50 |
