Gene Information

Name : CBF_1645 (CBF_1645)
Accession : YP_005674565.1
Strain : Clostridium botulinum 230613
Genome accession: NC_017297
Putative virulence/resistance : Virulence
Product : antibiotic ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1762386 - 1763093 bp
Length : 708 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGGAAAAATATATTTTACAAACAAAAGATATTTGTAAAGTCTTTAAAGGTCAGCATGCAGTAAACAATATTTCAATTAC
AGTGAGAGAGAATTCTGTGTATGGATTATTAGGGCCTAATGGGGCAGGAAAATCTACTATGTTAAAAATGTTAACAGGAA
TGTTACGTCCCACATCCGGGAAAATTATATTTGACAAGCATCATTGGACTAGAAAGGATTTAGTGAGTATTGGCGCTTTT
ATTGAAGCTCCACCCCTTTATGAAAATTTAACTGCAAGGGAAAATTTAAAAGTTCGTACTACTCTTTTAGGGTTAAAAGA
CTCACGGATTGATGAAGTATTAAAAATTGTTGATTTAACCAATACAGGTAAAAAAACCGCTGGTAAGTTTTCAATGGGTA
TGAAACAACGTTTAGGGATTGCCATTGCTCTAATTAACAATCCTAAACTATTGATATTAGATGAACCAACAAATGGTCTT
GATCCTATTGGCATTCAAGAGTTACGTGAATTAATTCGATCATTTCCAAAGCAAGGAATAACAGTTATTTTATCTAGTCA
TATTTTAGCGGAGGTTCAGCTTATTGCAGACCACATTGGAATTATAAGTAATGGGATCTTAGGATATGAAGCAAAAATTA
ATCCTTCAGAGAATTTAGAAACACTTTTCACAGAAGTAGTAAAAAAGAATAAAAAAAGGAGGGCATAA

Protein sequence :
MEKYILQTKDICKVFKGQHAVNNISITVRENSVYGLLGPNGAGKSTMLKMLTGMLRPTSGKIIFDKHHWTRKDLVSIGAF
IEAPPLYENLTARENLKVRTTLLGLKDSRIDEVLKIVDLTNTGKKTAGKFSMGMKQRLGIAIALINNPKLLILDEPTNGL
DPIGIQELRELIRSFPKQGITVILSSHILAEVQLIADHIGIISNGILGYEAKINPSENLETLFTEVVKKNKKRRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 8e-44 51
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 8e-44 51
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 8e-44 51
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 9e-44 51
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 2e-42 51
cdd4 CAA63569.1 - Not tested PaLoc Protein 2e-43 50
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 4e-41 43
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 7e-41 43
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 1e-31 43
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 1e-29 41