|
Name : CBF_1484 (CBF_1484) Accession : YP_005674422.1 Strain : Clostridium botulinum 230613 Genome accession: NC_017297 Putative virulence/resistance : Unknown Product : C4-dicarboxylate transporter Function : - COG functional category : - COG ID : - EC number : - Position : 1582750 - 1584270 bp Length : 1521 bp Strand : + Note : identified by match to protein family HMM PF03600; match to protein family HMM PF03606; match to protein family HMM PF06808 DNA sequence : GTGACAAAAAAGAAAAAGAAAATAAGCTTTCCGACAGCTTTTACGGTATTGTTTATTGTATTAATTATTGCAGCTATACT TACTTATGTAGTTCCAGCTGGATCTTATTCAAAATTGAGTTATGATAACGATAGTAAAGTTTTTGTTGTAACTAAACCAG ATGAATCGACAAATGAATTACCAGCAACACAAAAGACTTTGGATAAACTTAAGATTAAAGTAAGTGTAGAAAAATTTAAA GATGGTAGTATTAATAAGCCTGTAGCTATTCCAGATACTTATGAACAGGTAGAACAGAAACCTCAAGGGTTTTTTGAAGT AATTGAAGCACCTATTAAAGGGGTGTATGATACTATCGATATTATAATGTTTGTACTTATTTTAGGAGGAGTTATTGGTG TAGTAAATAGTAGTGGAGCATTTGATGCAGGTATTGCCAAACTTTCTGTAGCTACTAAGGGTAAAGAATACCTATTAATA GTTATTATCACTACATTAATTGCTTTAGGTGGAACTACTTTTGGACTAGCAGAAGAAACCATTGCATTATATCCAATACT GGTTCCAGTTTTTATAGCAGCAGGATACGATGCTTTAGTTTGTATTGCAGCCTTGTATATGGGATCATCTATAGGTACTA TGTTTGCTACGGTAAATCCTTTTTCTGTTGTTATAGCATCTAATACTTCAGGAATATCTATTGCTTCAGGATTTATATTT AGAATTGTAGGACTTATTTTAGCAGTAGCTATAACTATTGTTTACATTGTAAAATATGGAGTTAAGGTTAAAAAAGACCC AAGCAAATCTATAATATATGAACAAAGGAAAGAAATACAAGAGAAGTTTTTAAAAGATTATAGTAAGGATGATGTTACTC TAAAATTTTCTTTAGGTCGTAAGCTAATGTTAATAATATTCGCATTAACATTCGTAGTTATGATTTGGGGTGTAGCTTAT AAAAAATGGTGGTTTACTGAGATGACAGCTCTGTTCCTTGTTGTAGGGATTATTTTAGGTGTAATCTCACGAATGGGAGA AAAGAATTTTGTAGATAAGTTTGTAGCTGGCTCAGCTGATTTGGTAGGAGTTGCATTAGTAATTGGAGTTGCAAGATCTA TTAATCTTGTTATGGAAAATGGAATGATTTCTGATACAATTTTGTATCATTCTTCAAATATGATATCAGGAATGAATTCT AGTGTATTTATAATATTTATGTTAATTGTATTTATAGGACTTGGATTTTTTATACCATCATCTTCAGGACTTGCAGTGCT TTCAATGCCTATTATGGCACCTCTAGCAGACAGTGTAGGATTGCCAAGAGAGACTATAGTAAATGCTTATATGTTTGGCC AGGGATTAATTTCATTCATAACTCCAACAGGACTTATATTAGCTACATTAGCTATGGTAGATGTTACTTATGATAAATGG ATTAAATTTATAATGCCACTTATGGGATATATAGCAGCCTTATCAGCTATAATGTTATTAATACAAAGCTTTGTTGCTTA A Protein sequence : MTKKKKKISFPTAFTVLFIVLIIAAILTYVVPAGSYSKLSYDNDSKVFVVTKPDESTNELPATQKTLDKLKIKVSVEKFK DGSINKPVAIPDTYEQVEQKPQGFFEVIEAPIKGVYDTIDIIMFVLILGGVIGVVNSSGAFDAGIAKLSVATKGKEYLLI VIITTLIALGGTTFGLAEETIALYPILVPVFIAAGYDALVCIAALYMGSSIGTMFATVNPFSVVIASNTSGISIASGFIF RIVGLILAVAITIVYIVKYGVKVKKDPSKSIIYEQRKEIQEKFLKDYSKDDVTLKFSLGRKLMLIIFALTFVVMIWGVAY KKWWFTEMTALFLVVGIILGVISRMGEKNFVDKFVAGSADLVGVALVIGVARSINLVMENGMISDTILYHSSNMISGMNS SVFIIFMLIVFIGLGFFIPSSSGLAVLSMPIMAPLADSVGLPRETIVNAYMFGQGLISFITPTGLILATLAMVDVTYDKW IKFIMPLMGYIAALSAIMLLIQSFVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAKOR_01092 | YP_008491280.1 | Arginine/ornithine antiporter | Not tested | vSa¥ã | Protein | 4e-95 | 46 |
| SAV1171 | NP_371695.1 | hypothetical protein | Not tested | vSa¥ã | Protein | 4e-95 | 46 |
| SA1014 | NP_374287.1 | hypothetical protein | Not tested | vSa¥ã | Protein | 4e-95 | 46 |
| MW1052 | NP_645869.1 | hypothetical protein | Not tested | vSa¥ã | Protein | 3e-95 | 46 |
| SACOL1183 | YP_186046.1 | hypothetical protein | Not tested | vSa¥ã | Protein | 5e-95 | 46 |
| SAUSA300_1064 | YP_493762.1 | TRAP family protein | Not tested | vSa¥ã | Protein | 5e-95 | 46 |
