Gene Information

Name : CBF_1281 (CBF_1281)
Accession : YP_005674231.1
Strain : Clostridium botulinum 230613
Genome accession: NC_017297
Putative virulence/resistance : Resistance
Product : putative oligopeptide ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1377163 - 1377786 bp
Length : 624 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGAAAGTAGACATACTTAAAGGGGTTTCTGTAAAAATTGAAAAGGGTGAATTTGTTGCTATCATTGGTGAGTCTGGTTC
TGGTAAATCTACCTTTCTAAATATATTAGGTGGTTTAATGCCTCCTTCCTCTGGCGATATTTTTATTGAAAATGAAAAAA
TCAATGGTCTTTCTGAAAATAATTTAGCTTTATTTAGAAGACATAATATAGGCTTTGTTTTTCAGTCCTATAATTTAATC
CCTCAACTTACAGCTTTAGAAAATGTGGAAATGCCTCTTATTTTTTCAGGGATTTCTAAAAAAGAACGAAAAAATAGAGC
CTTTGAAATGCTTAAAAAAGTTGGACTTGAAGAAAGAGCTCATCATAAGCCTTCTGAACTATCCGGTGGACAACAGCAAA
GGGTTTCCATTGCTAGAGCTCTAGTAAACTATCCTAAAATAGTGCTTGCTGATGAACCTACTGGAAATTTAGATAGCAAA
AATGGTACAGAAATTCTAAATATATTAAAAGAATTAAACCAAACCACTGGACAAACCTTTGTAATTGTTACTCACTCTTC
TCAAGTTTGTGATTATGCAAATAAAATAATAAAAGTGGTAGACGGAAAAGTATTCAATAACTAA

Protein sequence : 
MKVDILKGVSVKIEKGEFVAIIGESGSGKSTFLNILGGLMPPSSGDIFIENEKINGLSENNLALFRRHNIGFVFQSYNLI
PQLTALENVEMPLIFSGISKKERKNRAFEMLKKVGLEERAHHKPSELSGGQQQRVSIARALVNYPKIVLADEPTGNLDSK
NGTEILNILKELNQTTGQTFVIVTHSSQVCDYANKIIKVVDGKVFNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 44
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-27 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-34 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-26 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 43
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 4e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CBF_1281 YP_005674231.1 putative oligopeptide ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-49 52
CBF_1281 YP_005674231.1 putative oligopeptide ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-44 50
CBF_1281 YP_005674231.1 putative oligopeptide ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 7e-39 48
CBF_1281 YP_005674231.1 putative oligopeptide ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-46 47
CBF_1281 YP_005674231.1 putative oligopeptide ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 4e-36 45