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Name : CBF_1104 (CBF_1104) Accession : YP_005674064.1 Strain : Clostridium botulinum 230613 Genome accession: NC_017297 Putative virulence/resistance : Resistance Product : DNA-binding response regulator Function : - COG functional category : - COG ID : - EC number : - Position : 1174162 - 1174863 bp Length : 702 bp Strand : + Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486 DNA sequence : ATGAAGAAACTCTTTAAAATATTAGTTGTAGATGATGAAGAAAGGATATTAGATGTGGTAAAAGCTTATTTAGAAAAAGA AGATTATGAAGTGATAACTGCAATGGATGGTGAGGAAGCAATTAAGTTATTTAAAGAAACATCATTTCATTTAATTATAT TGGATTTAATGCTACCAAAGTTATCTGGTGAAGAGGTTTGTTCAAAGATAAGAGAATCTTCTAATGTTCCAATTATTATG CTTACAGCAAAGGTAGAGGAAGAGGATAAGCTAGAAGGTCTTTCTATAGGAGCAGATGATTATCTTACAAAACCTTTTAG TGTAAGGGAACTTGTGGCAAGAGTCAAGGCTCTTATTAGAAGGGCATATAGAGGAAAGTATCCATTGGCAGAGCATCTAA TACTTAATGATGGAGACTTAGAAGTTGACATAAGAAAAATGAAAGTATTAAAAAACGGAAAGGCGGTTACATTAACACCT TATGAGTTTAAAGTGCTTGTTTCACTATTAACTAATCCAGGGCAGGTTTTTACTAGAGAACAGTTAGTTGAACAAGCTTT TGGATATGATTATGAAAGCTTTAATAGGACTGTAGATACTTATATAAAAAATATAAGACAAAAGATAGAAGATAATCCTA AAGCACCTAACTATATTACTACTGTATATGGAGTTGGATACAGATTTGGAGGAAAAAATTAA Protein sequence : MKKLFKILVVDDEERILDVVKAYLEKEDYEVITAMDGEEAIKLFKETSFHLIILDLMLPKLSGEEVCSKIRESSNVPIIM LTAKVEEEDKLEGLSIGADDYLTKPFSVRELVARVKALIRRAYRGKYPLAEHLILNDGDLEVDIRKMKVLKNGKAVTLTP YEFKVLVSLLTNPGQVFTREQLVEQAFGYDYESFNRTVDTYIKNIRQKIEDNPKAPNYITTVYGVGYRFGGKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nisR2 | YP_006309922.1 | NisR | Not tested | FWisland_1 | Protein | 4e-27 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | NC_012469.1.7685629. | Protein | 5e-39 | 50 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | HE999704.1.gene2815. | Protein | 1e-38 | 45 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | NC_012469.1.7686381. | Protein | 5e-39 | 45 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | NC_002952.2859905.p0 | Protein | 2e-38 | 44 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | NC_002951.3237708.p0 | Protein | 3e-38 | 44 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | NC_003923.1003749.p0 | Protein | 3e-38 | 44 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | NC_002758.1121668.p0 | Protein | 3e-38 | 44 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | NC_007622.3794472.p0 | Protein | 2e-38 | 44 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | NC_009641.5332272.p0 | Protein | 3e-38 | 44 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | NC_013450.8614421.p0 | Protein | 3e-38 | 44 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | NC_007793.3914279.p0 | Protein | 3e-38 | 44 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | NC_002745.1124361.p0 | Protein | 3e-38 | 44 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | NC_009782.5559369.p0 | Protein | 3e-38 | 44 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | AE016830.1.gene1681. | Protein | 1e-36 | 44 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | AM180355.1.gene1830. | Protein | 3e-34 | 44 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | AF155139.2.orf0.gene | Protein | 2e-36 | 43 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | CP000675.2.gene1535. | Protein | 1e-39 | 43 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | NC_014475.1.orf0.gen | Protein | 1e-35 | 43 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | AF130997.1.orf0.gene | Protein | 1e-31 | 43 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | NC_005054.2598277.p0 | Protein | 1e-35 | 43 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | DQ212986.1.gene4.p01 | Protein | 7e-34 | 43 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | FJ349556.1.orf0.gene | Protein | 5e-36 | 41 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | AF162694.1.orf4.gene | Protein | 4e-30 | 41 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | AE000516.2.gene3505. | Protein | 2e-35 | 41 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | CP001918.1.gene3444. | Protein | 7e-39 | 41 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | BAC0039 | Protein | 4e-39 | 41 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | BAC0596 | Protein | 4e-39 | 41 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | CP000034.1.gene2186. | Protein | 4e-39 | 41 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | CP001138.1.gene2239. | Protein | 4e-39 | 41 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | CP000647.1.gene2531. | Protein | 1e-38 | 41 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | NC_002695.1.916589.p | Protein | 3e-39 | 41 |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | AF253562.2.orf0.gene | Protein | 5e-23 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CBF_1104 | YP_005674064.1 | DNA-binding response regulator | VFG1389 | Protein | 3e-29 | 41 |
