Gene Information

Name : CEA_G1713 (CEA_G1713)
Accession : YP_005670845.1
Strain : Clostridium acetobutylicum EA 2018
Genome accession: NC_017295
Putative virulence/resistance : Virulence
Product : Response regulator (CheY-like receiver domain and DNA-binding HTH domain)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1849777 - 1850475 bp
Length : 699 bp
Strand : +
Note : -

DNA sequence :
ATGGCAGGCGAAAAAATACTTGTTGTAGATGATGAGGAGCATATAGTCAAGCTTATAAAATTTAACCTTGAAAACAATGG
ATATAAGGTTATTACGGCAGCAGATGGTGGTGAAGCACTAGAAAAGGCAAAGGGAGAAGTGCCTCAACTGGTTCTTCTAG
ATTTAATGCTTCCAGTTATGGATGGCTACGATGTTTGTAGAGAAATACGAAGGGATCAATCCATTTCAAACATGCCTGTA
ATTATGATAACAGCAAAGGGAGAAGAATTGGACAAAATATTAGGCTTGGAGCTTGGAGCAGATGATTATATAACTAAACC
TTTTTCAGTTAGAGAATTAGTTGCAAGGGTGAAGGCAGTATTAAGAAGGACTAAGGTTGATTATATAGATAAAACTTTTA
AATTTGGTAATATTCAAATAGATTTTCAAAGGCATAATGTTACCAAAGAGGGAGAAAAGGTAGAGCTTACCCTTAAGGAA
TTTGAACTTCTTCAAGTACTTATAAAGAATAAGGGCAGAGTAATGACAAGGGATTTTTTACTTGATAAAATATGGGGATA
TGAATACATTGGAGAAACACGTACGGTAGATGTTCACGTGAGGCATTTAAGGCAAAAAATTGAAGATGATGATAAAAATC
CAAAATATATAGAAACTATAAGAGGAATAGGGTATAGATTTAACTATAGTGGTGATTAA

Protein sequence :
MAGEKILVVDDEEHIVKLIKFNLENNGYKVITAADGGEALEKAKGEVPQLVLLDLMLPVMDGYDVCREIRRDQSISNMPV
IMITAKGEELDKILGLELGADDYITKPFSVRELVARVKAVLRRTKVDYIDKTFKFGNIQIDFQRHNVTKEGEKVELTLKE
FELLQVLIKNKGRVMTRDFLLDKIWGYEYIGETRTVDVHVRHLRQKIEDDDKNPKYIETIRGIGYRFNYSGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 6e-34 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) HE999704.1.gene2815. Protein 2e-46 54
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) NC_002952.2859905.p0 Protein 1e-50 53
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) NC_002745.1124361.p0 Protein 9e-51 53
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) NC_009782.5559369.p0 Protein 9e-51 53
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) NC_002951.3237708.p0 Protein 9e-51 53
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) NC_002758.1121668.p0 Protein 9e-51 53
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) NC_009641.5332272.p0 Protein 9e-51 53
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) NC_013450.8614421.p0 Protein 9e-51 53
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) NC_007622.3794472.p0 Protein 1e-50 53
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) NC_007793.3914279.p0 Protein 9e-51 53
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) NC_003923.1003749.p0 Protein 1e-50 53
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) NC_012469.1.7685629. Protein 3e-43 50
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) NC_012469.1.7686381. Protein 4e-45 48
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) AE016830.1.gene1681. Protein 1e-43 47
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) AE000516.2.gene3505. Protein 1e-35 45
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) NC_013450.8614146.p0 Protein 2e-34 43
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) NC_002951.3238224.p0 Protein 2e-34 43
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) NC_007793.3914065.p0 Protein 2e-34 43
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) NC_002758.1121390.p0 Protein 2e-34 43
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) NC_010079.5776364.p0 Protein 2e-34 43
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) AE015929.1.gene1106. Protein 2e-30 43
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) NC_002952.2859858.p0 Protein 2e-34 43
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) NC_007622.3794948.p0 Protein 2e-34 43
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) NC_003923.1003417.p0 Protein 2e-34 43
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) AF155139.2.orf0.gene Protein 2e-35 42
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) FJ349556.1.orf0.gene Protein 1e-34 42
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) HE999704.1.gene1202. Protein 5e-29 41
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) NC_005054.2598277.p0 Protein 7e-34 41
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) NC_014475.1.orf0.gen Protein 7e-34 41
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) AM180355.1.gene1830. Protein 1e-30 41
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) DQ212986.1.gene4.p01 Protein 5e-31 41
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) CP004022.1.gene1676. Protein 8e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) VFG1563 Protein 3e-34 41
CEA_G1713 YP_005670845.1 Response regulator (CheY-like receiver domain and DNA-binding HTH domain) VFG1702 Protein 1e-33 41