Gene Information

Name : cdrC (CEA_G1428)
Accession : YP_005670560.1
Strain : Clostridium acetobutylicum EA 2018
Genome accession: NC_017295
Putative virulence/resistance : Resistance
Product : Methyl methane sulfonate/mytomycin C/UV resistance protein, TerE family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1558105 - 1558680 bp
Length : 576 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTATAATATTAACAAAAGGTCAAAAAATAAATTTATCAAAAGAAGGAATTTTAAAAAAGATATTAGTAGGTTTAGG
CTGGGATACAAATAAATATGATGGTGGATATGATTTTGATTTAGATGCCTCAGTATTTTGTTGTGGAGAAGACGGAAAAG
CACATAAAGATACAGACTTTGTATTCTACAATAACTTAAAACATCCTTCAGGTGCAATAGAGCATTTAGGAGATAATTTA
ACTGGTGGAGGAGAAGGAGATGACGAGCAGGTAGTAATAGATCTTGAAAAAGTGCCTGAAGAAATACAGAAAATAGCTTT
CTCAGTAACTATTTATGATCCGGAAGTAAGAAAACAAAACTTTGGACAAGTTTCCAATGCTTTTGTAAGAATAGTTAACT
CAGATAATAATGAAGAATTAGTAAGATATGATTTAGGAGAAGATTTTTCAATAGAAACTGCAGTTGTAGTAGCAGAATTA
TATAGAAATAATGGAGACTGGAAGTTTAATGCTATAGGAAGCGGTTTCCAAGGTGGACTAGCAGCTTTATGTAAAAATTA
TGGACTTAATGCTTAG

Protein sequence : 
MAIILTKGQKINLSKEGILKKILVGLGWDTNKYDGGYDFDLDASVFCCGEDGKAHKDTDFVFYNNLKHPSGAIEHLGDNL
TGGGEGDDEQVVIDLEKVPEEIQKIAFSVTIYDPEVRKQNFGQVSNAFVRIVNSDNNEELVRYDLGEDFSIETAVVVAEL
YRNNGDWKFNAIGSGFQGGLAALCKNYGLNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ACY75542.1 tellurium-resistance protein Not tested Tn6060 Protein 7e-51 58
tlrB AAF36434.1 putative tellurium resistance protein B Not tested TAI Protein 2e-48 57
terE NP_286711.1 phage inhibition, colicin resistance and tellurite resistance protein Not tested TAI Protein 3e-48 57
terE_2 NP_287119.1 phage inhibition, colicin resistance and tellurite resistance protein Not tested TAI Protein 3e-48 57
tlrC AAF36435.1 putative tellurium resistance protein C Not tested TAI Protein 6e-49 55
terD NP_286710.1 phage inhibition, colicin resistance and tellurite resistance protein Not tested TAI Protein 3e-49 55
terD_2 NP_287118.1 phage inhibition, colicin resistance and tellurite resistance protein Not tested TAI Protein 3e-49 55
unnamed ACY75541.1 tellurium-resistance protein Not tested Tn6060 Protein 2e-45 51
terZ ACY75546.1 tellurite resistance protein TerZ Not tested Tn6060 Protein 2e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cdrC YP_005670560.1 Methyl methane sulfonate/mytomycin C/UV resistance protein, TerE family protein BAC0390 Protein 5e-49 56
cdrC YP_005670560.1 Methyl methane sulfonate/mytomycin C/UV resistance protein, TerE family protein BAC0389 Protein 2e-49 55