|
Name : polA (CEA_G1109) Accession : YP_005670242.1 Strain : Clostridium acetobutylicum EA 2018 Genome accession: NC_017295 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : - COG ID : - EC number : - Position : 1264001 - 1266616 bp Length : 2616 bp Strand : + Note : - DNA sequence : ATGGAAAGACTGCTTGTGTTAGATGGTAATAGTCTTATGAATAGGGCTTTTTATGCTTTGCCTGAACTTACAAATGCTGA AGGACTCCATACAAATGGAATATATGGCTTTATGACTATGCTTATAAAAATGCGAGATGAAATAAAGCCTGATTACATAG TTACAACCTTTGATAGGAAAGCACCTACCTTTAGACATAAGGAATACGAGGATTACAAGGCAGGAAGAAAAAAAATGCCT CCTGAACTTAGTGAGCAGTTTCCTGTATTAAAAGAATTACTTGAAAAGTTAGCTATAAACATATTTGAAATAGATGGTTT TGAGGCCGATGACCTCATAGGAACATTAGCATGTTTTGCTAAAGAAAAGGGAATAGAAGTATACATAGTTACAGGGGATA AAGATGCCCTTCAGCTTGCAGATGATAATGTTAAGGTTGTTATAAATAAAAAAGGAATGACCGAAAAAGAAATATACGAT AAAAATAGAATGATTGAAGAGTTTGGTGTTACTCCAGTTCAGTTTATAGATGTAAAAGGACTTATGGGAGATAATTCTGA CAACATACCGGGAGTACCAGGAATAGGCCCTAAGACAGCCTTTAAGCTCATACAAGAATACGGCAGTGTAGAGAATGTTC TCGACAATATACAAAATATAAAAGGCAAAAAAATAAAAGAGAACTTAGAGAATTATGCAGAGCAAGCAGTTTTTAGTAAA AAGCTTGCAACCATAATGACTAATGTTCCTATTGAAATAGATATTGAGGAAATAAGATCTAAAGAAAGTTTTGATGTTGA GGGTGCTAGACATCTTTTAAGAAGACTTCAATTTAAGAGTATAATAGAAAAAATTCCAAGTCTTAATGTTGAAGCGGAAA AAAGTGATTTTGTTGTAGAGTATAATTTAATAGACGAATTTCCAAAATTTCATGAATTATTTTCAGCTATTAAAGATACT GAAATTTATATGTCATATTCTATAGGAAATGGAGAGCTGTATTCTAAGATTTATATTGATACAATTTTTATGAAAGTAGA AGAAAAGACATATATAGTAGATTTAAAGAAAATAATTGAGCAAAATAGAGAAGATGTTCTCAAAGATTTAAAAGAGTTCT TTGAGAATAAGAAAATAGCTAAGATAATACATGATTCTAAAAATATGTATACAGTGCTTATGAAGAATGGCATAAAAATA GAGAATCTGGCATTTGATACGGCAATAGCAGAATACCTTATAAATCCATCTAAAAAAGAGTACAATTTAAAAGACGCGGC GGAAGAGATGCTCTTATTGGATTTGACGGGAGAAGACAATGATATTAAAATAAAAGAAGTTTACGTTATGGATAAAATTT ACAATAAACTTAAAGACAAAATAAAAGAATATGATATGGATGAGTTATACTATAAAGTAGAGCTTCCACTCATAGAAGTT TTATCCTCTATGGAGAGTGAAGGATTTAAGGTTGAAAAAAATAAACTTCAACAAATTGGCGATAAATTTACAGTTGAAAT AGCAAAGGTTAAAGATGAAATATATAACATGGCAGGTGAGGAGTTTAATATAAGTTCTCCAAAGCAACTTGGAAAAATAT TATTTGAAAAATTGGATTTACCAGTTATAAAGAAAACCAAAACGGGTTACTCCACTAATGCTGAGGTTTTGGAAAAGCTG ATGGATAAGCATCCTATAATTGAAAAGGTTGTATACTATAGACAGCTTACAAAACTCTATTCAACATATGTTGAAGGACT TAAACCTGTTATAGATGTTGATGAAAAGATACATTCAAGTTTTAATCAAACTGTAACTACAACAGGTAGGCTTTCAAGTA CAGAACCAAATCTTCAAAACATACCTATTAAAAATGAGATGGGAAGAGAAATAAGGAAAGTTTTTGTGCCTGAAAATGAT AATTGTATAATACTTTCAGCAGACTATTCCCAAATAGAATTAAGAGTTTTAGCTCATATTGCTGATGATGAAAATTTAAT TAATGCATTTAAACATCACAGTGATATCCATACAAAGACAGCTTCGGAGGTTTTTAGAGTACCTATTGAAGAGGTTACGT CTAGAATGAGAAGTAATGCAAAGGCTGTAAACTTTGGAATTGTCTATGGAATAAGTGATTTCAGTCTAGCTCAGGATATA AAGGTATCCAAGAAGGAAGCTAAAGAATACATTGATACTTATTTTGAAAGATATCCAAATGTAAAAAAATACTTGGAGGA TATAGTGGTTACAGCTAAAAAGAATATGTATGTAAACACTATAATGAACAGAAGAAGAATTATTCCAGAAATAGCCTCAT CAAATAAAATTGTTAAAGGCTTTGGAGAGAGACTTGCTATGAATACACCTATACAGGGAAGTGCAGCAGATCTTATAAAA CTTTCAATGGTTAATGTGTATAGTAAAATAAAGCAACTAAAGCTTAAAAGTAGGCTTATACTTCAAGTGCATGATGAACT AATTTTGAATGTACATAAGGATGAACTCGAAAAAGTAAAGGAATTAGTAAAACTTGAAATGGAAGAGGTTATGGAACTTA AAGTTCCTTTGGAAGTAGATATAGAATCAGGAAATACCTGGTATGAAGCAAAATAA Protein sequence : MERLLVLDGNSLMNRAFYALPELTNAEGLHTNGIYGFMTMLIKMRDEIKPDYIVTTFDRKAPTFRHKEYEDYKAGRKKMP PELSEQFPVLKELLEKLAINIFEIDGFEADDLIGTLACFAKEKGIEVYIVTGDKDALQLADDNVKVVINKKGMTEKEIYD KNRMIEEFGVTPVQFIDVKGLMGDNSDNIPGVPGIGPKTAFKLIQEYGSVENVLDNIQNIKGKKIKENLENYAEQAVFSK KLATIMTNVPIEIDIEEIRSKESFDVEGARHLLRRLQFKSIIEKIPSLNVEAEKSDFVVEYNLIDEFPKFHELFSAIKDT EIYMSYSIGNGELYSKIYIDTIFMKVEEKTYIVDLKKIIEQNREDVLKDLKEFFENKKIAKIIHDSKNMYTVLMKNGIKI ENLAFDTAIAEYLINPSKKEYNLKDAAEEMLLLDLTGEDNDIKIKEVYVMDKIYNKLKDKIKEYDMDELYYKVELPLIEV LSSMESEGFKVEKNKLQQIGDKFTVEIAKVKDEIYNMAGEEFNISSPKQLGKILFEKLDLPVIKKTKTGYSTNAEVLEKL MDKHPIIEKVVYYRQLTKLYSTYVEGLKPVIDVDEKIHSSFNQTVTTTGRLSSTEPNLQNIPIKNEMGREIRKVFVPEND NCIILSADYSQIELRVLAHIADDENLINAFKHHSDIHTKTASEVFRVPIEEVTSRMRSNAKAVNFGIVYGISDFSLAQDI KVSKKEAKEYIDTYFERYPNVKKYLEDIVVTAKKNMYVNTIMNRRRIIPEIASSNKIVKGFGERLAMNTPIQGSAADLIK LSMVNVYSKIKQLKLKSRLILQVHDELILNVHKDELEKVKELVKLEMEEVMELKVPLEVDIESGNTWYEAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 7e-150 | 43 |
