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Name : hsdR (MOUSESFB_0020) Accession : YP_005667738.1 Strain : Candidatus Arthromitus sp. SFB-mouse-Yit Genome accession: NC_017294 Putative virulence/resistance : Unknown Product : HsdR family type I site-specific deoxyribonuclease Function : - COG functional category : - COG ID : - EC number : - Position : 27530 - 30565 bp Length : 3036 bp Strand : + Note : - DNA sequence : ATGTCATACACAGAAGCGAATTATGAAAATGCTTTGATTGAGGTTTTCAGAGATACTCTTTCTTATAATTATTTATACGG ACCAGATATAAGCCGTGATTATTCAGATGCTATTTATATGGATGAGCTTACACCATCTCTTAAGAGAATAAACAAAGACA TCCCACAATCTGCAATTAATGAATGCATAAATAAACTAAGAAACATTGAAGGTGGAACCTTACTTGATAAAAATAGAATA TTTATGAATTATCTACAAAATGGAGTGAGCGTCAACTGTTTTAATAACGGAAATCAGGAAAGCTATTTAGTTAAGCTTGC CGATTATAACTGCCTAGAGAAAAATACCTTCACAATAGTTAATCAGTGGACAATTGTTGAAAATAGTGAGAAGAGACCAG ACCTTATTTTATTTTTAAATGGTATTCCTATTGTGGTATTTGAGCTTAAGTCTCCAAGTCGTGAAGAGACAAGCGTGTCA GAAGCATATAATCAGCTCAGAAATTATATGTACGAGATACCTTCTCTTTTTAATTACAATGCTTTTTTAGTTATGAGTGA TCTTGCAGTATCAAAGGCTGGAACTATAACAAGTAGTGAAGATAGATTCATGGAGTGGAAAACTAAGGATGGAAGCTATG AAAATACCTCTTATGCTCAGTTTGATACTTTTATTGAAGGAATGTTTGATAAAGCTCGCCTACTTGATATCATCAAAAAT TTTATATGCTTTTCTGAAAATTCAAAAATATTTTCAGCCTATCATCAATATTTCGCTGTTAGAAAAGCTATTAAATCGAC TCTTAATGCTTTAGAAAGCGATGGAAAAGCTGGAGTATTTTGGCACACACAAGGGAGTGGTAAATCCCTATCTATGCTAT TTTATGCTCATCTTCTTTGTGAAACCATAAATTCTCCAACTATACTTGTACTTACAGATAGAAATGATTTAGATGATCAA CTCTTCTCTCAGTTTTCTAAATGTAAAGATTTTCTTTATCAAGTTCCAAATAAGGCAGAAAGCCGTGAGCATTTGAAAAA ACTTCTTGCTGGAAGAGAGGCAAATGGAATCATTTTTTCAACAATTCAAAAGTTTGAGGAAAGTACAGAGCCTCTATCAG AGAGAAAAAATATTATAATCATGGCAGATGAGGCCCATAGGGGACAGTATGGATTAGATGAGAAAGTTGATAAAAATACA GGGCGTATAAGTTTTGGTATAGCTAGAATAATACGAGATAATTTCCCTAACGCAACATATATAGGTTTCACAGGAACTCC GATTTCATTAAAAGATAGATCTACAATTGAGGTGTTTGGAAATTATATTGATATATATGATATGACTCAAGCTGTAGAAG ATGGAGCAACTCGCCCAGTTTATTATGAAAGCCGTGTAATTAAATTGAATTTGGATAACTCTATATTGGAGATGATAGAT AAAGAGTATGAAATTTTATCTAATAACGCTGAGATTCATGCAATTGAGAAGAGTAAAAAAGAACTTGGAAGATTAGAGAG TATACTTGGAGCAGATCAAACTATAGACTCTTTAACTAGAGATATCGTAATGCACTATGAAGAAAACAGACAGTATGAAT TAACAGGTAAAGCAATGATAGTTGCATATTCTCGCCCTATTGCTATGAAAATTTATCATAAAATTTTAGAATTAAAGCCT GAATGGGAAGAAAAAGTATATGTTGTTATGACTTCAGGAAATAACGATCCAGAAGATTGGAGAAAAATAATAGGAAATAA ACGTTATAAGGATGAACTAGCCAAAAAATTTAAGGATAATGGATCTTCATTTAAAATAGCAATTGTTGTTGATATGTGGC TTACTGGATTTGATGTTCCATCTCTTGCAACTATGTATATATATAAACCTATGAGTGGTCATAATTTAATGCAGGCTATA GCTAGAGTTAATAGAGTTTATAAAAATAAAGAGGGCGGACTTATAGTTGATTATATTGGAATTGCAGGAGCTTTGAAAAA GGCGATGAGCGATTACACAAAGAGAGATAAGGTAAATTATGGGGAGAGTGATATCTCAAAAATTGCTTATCCAAAGTTTA TAGAAAAACTTGAGGTATGTCGTGCTCTTTTGCATGGGTTTGATTATTCCTCATTTATGCTTAAATCATTAACAGATCTT ACGCGTGCAAAACTTATAAGTGGAGGCGTTAACTTTCTATCAGATCCATCAAGAAAGGAGGATAAAAAATTCTATATAAA AGAGTCGCTTCTCTTGCGTCAATCTGTTTCACTTTGTCGCTCTATTTTAACTAAGGATCAAAGACTTGAATCTGCATATT TTGAAGCACTTCGTACACTACTTACACGCATAACAGGAGAAAATAAACCTCTTTCTTTAAAAGATATAAATAAGCATATT AATGACTTATTAAAAGAGAGTATAAAAAGTGATGGTATTATAAATTTATTTTCTGATATTGATATTGGGGTTTCTATATT TGATGAAAAATTTTTAGAAGAAGTTTCAAATATGAAAGAGAAGAATTTGGCAGTTGAAATGTTAAAGAAACTTTTAAATG AACAGATTTCAGTATATAAAAGGAATAATATTGTTAAATCACAAAAATTTTCGGAAATGTTAAATAAGGCTATGAGGTTA TATATAAATGGAATGATCACAAATGAAGAGATAATAGAAGAGCTATTAAAGATGGCACGAGATATATCACGCTCCTCAGA AGAGGCAGAATCACTTGGACTTAGTGATGAGGAGATGGCATTTTATGATGCACTAACTCGACCAGAGGCTATAAAAGATT TTTACACAAATCAAGAACTTGTAGCACTCACTCGTATGCTTACAGACAGCTTAAGAAGAAGTAGAACTATAGATTGGCAG AAAAAGGATACTGCGAGAGCAAAAATGCGTAGAATGGTTAGAAAACTTTTAAAAGACTATGATTATCCACCAAAAGGTTT AGAGGATGCCGTGGCAACAGTATTATCTCAATGCGAAATTTGGGCAGATTTTGGAGAAGAAAGTTATAGAGTTTAA Protein sequence : MSYTEANYENALIEVFRDTLSYNYLYGPDISRDYSDAIYMDELTPSLKRINKDIPQSAINECINKLRNIEGGTLLDKNRI FMNYLQNGVSVNCFNNGNQESYLVKLADYNCLEKNTFTIVNQWTIVENSEKRPDLILFLNGIPIVVFELKSPSREETSVS EAYNQLRNYMYEIPSLFNYNAFLVMSDLAVSKAGTITSSEDRFMEWKTKDGSYENTSYAQFDTFIEGMFDKARLLDIIKN FICFSENSKIFSAYHQYFAVRKAIKSTLNALESDGKAGVFWHTQGSGKSLSMLFYAHLLCETINSPTILVLTDRNDLDDQ LFSQFSKCKDFLYQVPNKAESREHLKKLLAGREANGIIFSTIQKFEESTEPLSERKNIIIMADEAHRGQYGLDEKVDKNT GRISFGIARIIRDNFPNATYIGFTGTPISLKDRSTIEVFGNYIDIYDMTQAVEDGATRPVYYESRVIKLNLDNSILEMID KEYEILSNNAEIHAIEKSKKELGRLESILGADQTIDSLTRDIVMHYEENRQYELTGKAMIVAYSRPIAMKIYHKILELKP EWEEKVYVVMTSGNNDPEDWRKIIGNKRYKDELAKKFKDNGSSFKIAIVVDMWLTGFDVPSLATMYIYKPMSGHNLMQAI ARVNRVYKNKEGGLIVDYIGIAGALKKAMSDYTKRDKVNYGESDISKIAYPKFIEKLEVCRALLHGFDYSSFMLKSLTDL TRAKLISGGVNFLSDPSRKEDKKFYIKESLLLRQSVSLCRSILTKDQRLESAYFEALRTLLTRITGENKPLSLKDINKHI NDLLKESIKSDGIINLFSDIDIGVSIFDEKFLEEVSNMKEKNLAVEMLKKLLNEQISVYKRNNIVKSQKFSEMLNKAMRL YINGMITNEEIIEELLKMARDISRSSEEAESLGLSDEEMAFYDALTRPEAIKDFYTNQELVALTRMLTDSLRRSRTIDWQ KKDTARAKMRRMVRKLLKDYDYPPKGLEDAVATVLSQCEIWADFGEESYRV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 41 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 41 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 41 |
