Gene Information

Name : kdsB (CPS0C_0647)
Accession : YP_005666228.1
Strain : Chlamydia psittaci C19/98
Genome accession: NC_017291
Putative virulence/resistance : Virulence
Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.38
Position : 666782 - 667546 bp
Length : 765 bp
Strand : +
Note : [M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase

DNA sequence :
ATGGAAGAGCAAACGTTTATCAGTAAGAAGGTTGGAGTTTTACCAGCGAGATGGGGCAGTGTCAGATTTCCTGGGAAGCC
TTTAGCCATGATCCTAGGAAAATCCTTAATTCAAAGAACTTATGAAAATATCATTCAAAGCGAAACACTAGATAAAGTAG
TTGTAGCTACTGATGATCAACGCATTATGGATCACGTGATAGATTTTGGTGGCGAGTGTGTTATGACCAGTCCAGAGTGC
GCCAATGGTACTGAACGGATGGCGGAAACCGTATCGCGTTATTTCCCTGAAGCTGAGATCATGGTGAATATCCAGGGGGA
TGAGCCCTGTTTACGCCATACCGTTGTAGATGCTCTTGTGAGAAAACTCGAAGAGAATCCAGAAATTCATATGGTGACTC
CTGTTGCTCAAACCACAGATCCTCATGAAATCTTAACAAATCAAAAAGTAAAATGTGTTTTCGATAAAAATGGAAAGGCT
TTATATTTCAGCAGAAGCGCTATTCCACACATTTTAAAAAAAGAGACACCGATTTATCTACATATTGGCGTGTATGCATA
TAGAAGATCTGCTTTGTTCAGTTACATTGCTTCCGCTCCTTCTCCTCTAAGCCAAGCTGAAGATCTTGAGCAACTACGTG
TATTAGAACACGGTGGATCCATTCATGTATGTGTAGTGGAAGCTAAGAGCCCTTCAGTCGATTATCCAGAAGATATAAAT
AAGGTGGAAGAATACTTAACATGCCATTCAAGTGCATCTTTTTAA

Protein sequence :
MEEQTFISKKVGVLPARWGSVRFPGKPLAMILGKSLIQRTYENIIQSETLDKVVVATDDQRIMDHVIDFGGECVMTSPEC
ANGTERMAETVSRYFPEAEIMVNIQGDEPCLRHTVVDALVRKLEENPEIHMVTPVAQTTDPHEILTNQKVKCVFDKNGKA
LYFSRSAIPHILKKETPIYLHIGVYAYRRSALFSYIASAPSPLSQAEDLEQLRVLEHGGSIHVCVVEAKSPSVDYPEDIN
KVEEYLTCHSSASF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 2e-36 42
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 1e-36 42
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 2e-36 41