Gene Information

Name : CPS0A_0390 (CPS0A_0390)
Accession : YP_005664052.1
Strain : Chlamydia psittaci 01DC11
Genome accession: NC_017289
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 405651 - 408188 bp
Length : 2538 bp
Strand : -
Note : [O] COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGTTTGAGAAGTTTACTAACAGAGCAAAACAAGTCATTAAATTGGCTAAAAAAGAAGCTCAGAGGTTAAATCATAACTA
TCTAGGCACAGAGCACATACTTCTAGGCCTACTCAAACTAGGTCAAGGCGTAGCTGTCAATGTATTGCGTAATTTAGGGG
TAGACTTTGACACTGCCAAGCAAGAAGTCGAACGCTTGATCGGTTATGGACCAGAAATCCAAGTTTACGGCGATCCCGCT
CTGACTGGCAGAGTAAAAAAATCTTTTGAATCAGCGAATGAAGAAGCTGGAATCTTAGAGCATAATTACGTCGGCACAGA
ACACCTGCTTTTAGGTATTTTAAACCAAGCTGACGGTGTTGCTCTACAAGTTTTGGAAAATTTACATATTGATCCTAGAG
AAGTTCGCAAAGAAATTCTTAAAGAATTAGAGACGTTTAATCTTCAGCTCCCACCTGCATCTTCGTCGAATCCCAGAGGG
AGTACTTCATCATCTTCCAAATCTTCCTCTCTTGGTCATACTTTAGGTGGAGACAAAAGCGATAAATTATCAGCATTAAA
AGCCTATGGTTATGATTTAACAGAGATGTTTCGCGAGTCTAAACTCGATCCTGTTATTGGCCGTTCTACAGAAGTGGAAC
GTTTAATTTTAATCTTATGCCGCAGAAGGAAAAACAACCCTGTACTTATCGGTGAAGCCGGTGTCGGAAAAACCGCTATT
GTTGAAGGCTTAGCACAAAAAATTATTTCTAATGAAGTGCCTGATACTTTACGTAAAAAGCGTTTAATCACTTTAGATCT
AGCCTTAATGATCGCGGGAACAAAGTATCGGGGTCAATTTGAAGAACGTATCAAAGCCGTTATGGACGAAGTCCGTAAAC
ATGGCAATATCCTGTTGTTTATCGATGAGCTGCATACAATTGTAGGCGCTGGCGCTGCGGAAGGAGCTATTGATGCTTCT
AACATTTTAAAGCCAGCACTAGCACGTGGTGAGATCCAGTGTATTGGAGCGACAACAATAGATGAATACCGCAAACATAT
TGAAAAAGACGCGGCTTTAGAACGTAGATTCCAGAAAATTATTGTCCAACCCCCAAGTGTGGACGAAACTATAGAGATTC
TACGTGGCTTAAAAAAGAAATATGAAGAACATCATAATGTTTCTATTACAGAAGAAGCGTTGAAAGCAGCAGCTACGCTA
TCTGATCAATATGTTCACGGACGCTTCCTCCCAGATAAAGCGATTGATTTACTTGATGAGGCTGGAGCACGAGTACGTGT
AAACACTATGGATCAGCCCACAGAGTTAATGAAGCTCGAAGCTGAGATTGAAACAACGAAATTAGCTAAAGAGCAAGCTA
TTGGCACTCAAGAATATGAAAAAGCTGCAGGATTACGCGACGAAGAGAAAAAGCTTCGTGAACGTCTTGCCAATATGAAG
CAAGAGTGGGAGAATCACAAAGAAGAACATCAAATTCCCGTTGATGAGGAAGCTGTTGCTCAAGTTGTTTCCTTGCAAAC
AGGCATCCCTTCTGCACGACTTACTGAAGCAGAGAGCGAAAAACTCTTAAAACTTGAAGATACTCTACGTAAGAAAGTCA
TAGGTCAAGATCAAGCTGTAGCGAGTATCTGTCGAGCAATTCGACGCTCAAGAACAGGAATTAAAGATCCTAACCGTCCT
ACAGGTTCCTTCTTATTCCTAGGACCTACTGGAGTTGGAAAAACACTACTTGCTCAACAAATCGCTATTGAAATGTTTGG
CGGTGAAGATGCTTTAATTCAAGTAGACATGTCTGAGTACATGGAAAAATTCGCTGCTACAAAAATGATGGGATCACCTC
CAGGATATGTTGGTCATGAGGAAGGTGGACATCTTACAGAACAAGTGCGTCGTCGTCCTTATTGTGTTGTGCTATTCGAT
GAGATTGAAAAAGCTCATCCAGACATCATGGATTTAATGTTGCAGATCTTAGAGCAAGGACGTCTCACAGATTCGTTTGG
TCGCAAGGTAGATTTTCGTCATGCAATTATCATCATGACTTCAAACTTAGGCGCCGACTTAATTAAGAAAAGCGGAGAAA
TCGGTTTCGGTGCTCGTTCCAATTTCGATTACAAAGTGATTCAAGAAAAAATTGAAAATGCTGTGAAGAAACATTTAAAA
CCGGAATTTATTAACCGTTTAGATGAAAGTGTGATCTTCCGTCCTTTAGAAAAATCAGCGTTATCTGAAATCATCCATTT
GGAAATTAACAAACTCGATTCTCGCTTGAAAAATTACCAGATGGCATTAAGTATTCCAGATTCTGTGATTTCTTTCTTAG
TAACGAAAGGACATTCTCCGGAAATGGGAGCACGGCCTTTACGTCGGGTTATTGAACAGTATCTTGAAGATCCTCTTGCA
GAACTCTTGCTGAAGGAATCTTGTCGTCAGGAAGCGCGAAAGCTACGTGCCCATCTCATTGAAGATCGTGTAACTTTCGA
GCGCTATGAAGAACAAGCTGAAAACGTTGCGGCAACTATACCAAATGTGGAGTCATAG

Protein sequence :
MFEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRNLGVDFDTAKQEVERLIGYGPEIQVYGDPA
LTGRVKKSFESANEEAGILEHNYVGTEHLLLGILNQADGVALQVLENLHIDPREVRKEILKELETFNLQLPPASSSNPRG
STSSSSKSSSLGHTLGGDKSDKLSALKAYGYDLTEMFRESKLDPVIGRSTEVERLILILCRRRKNNPVLIGEAGVGKTAI
VEGLAQKIISNEVPDTLRKKRLITLDLALMIAGTKYRGQFEERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGAIDAS
NILKPALARGEIQCIGATTIDEYRKHIEKDAALERRFQKIIVQPPSVDETIEILRGLKKKYEEHHNVSITEEALKAAATL
SDQYVHGRFLPDKAIDLLDEAGARVRVNTMDQPTELMKLEAEIETTKLAKEQAIGTQEYEKAAGLRDEEKKLRERLANMK
QEWENHKEEHQIPVDEEAVAQVVSLQTGIPSARLTEAESEKLLKLEDTLRKKVIGQDQAVASICRAIRRSRTGIKDPNRP
TGSFLFLGPTGVGKTLLAQQIAIEMFGGEDALIQVDMSEYMEKFAATKMMGSPPGYVGHEEGGHLTEQVRRRPYCVVLFD
EIEKAHPDIMDLMLQILEQGRLTDSFGRKVDFRHAIIIMTSNLGADLIKKSGEIGFGARSNFDYKVIQEKIENAVKKHLK
PEFINRLDESVIFRPLEKSALSEIIHLEINKLDSRLKNYQMALSIPDSVISFLVTKGHSPEMGARPLRRVIEQYLEDPLA
ELLLKESCRQEARKLRAHLIEDRVTFERYEEQAENVAATIPNVES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CPS0A_0390 YP_005664052.1 ATP-dependent Clp protease ATP-binding subunit VFG0079 Protein 0.0 51
CPS0A_0390 YP_005664052.1 ATP-dependent Clp protease ATP-binding subunit VFG0080 Protein 2e-144 49