Gene Information

Name : G5O_0495 (G5O_0495)
Accession : YP_005663158.1
Strain : Chlamydia psittaci 6BC
Genome accession: NC_017287
Putative virulence/resistance : Virulence
Product : type III secretion inner membrane protein SctV
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 517310 - 519439 bp
Length : 2130 bp
Strand : -
Note : -

DNA sequence :
ATGAATAAGCTACTCAATTTTGTCAGTAGAACCTTTGGGGGGGATGCAGCCCTAAATATGATCAACAAATCGAGTGACCT
CATCCTTGCCTTATGGATGATCGGTGTCGTTTTGATGATCATCTTGCCCCTACCTCCGACTATTGTCGACTTGATGATCA
CTATCAATTTAGCTGTTTCTGTCTTCCTATTGATGGTGGCTTTGTACATTCCTAGCGCTTTACAATTATCGGTGTTCCCC
TCGCTACTCCTAATCACAACAATGTTTCGATTAGGTATTAACATTTCTTCTTCTAGACAGATTCTTCTTAAAGCTTATGC
CGGTCACGTCATTCAAGCTTTCGGAGACTTCGTAGTTGGAGGGAACTATGTTGTTGGATTTATTATCTTCTTAATTATTA
CGATTATTCAATTTATCGTTGTTACCAAGGGTGCTGAGCGTGTTGCTGAAGTAGCTGCAAGATTCCGATTAGATGCTATG
CCTGGTAAGCAAATGGCTATTGATGCTGACTTGCGTGCCGGAATGATTGATGCACAACAAGCCCGCGATAAACGAGGCAT
GATTCAAAAGGAAAGTGAACTCTATGGAGCCATGGACGGTGCCATGAAGTTCATTAAAGGGGACGTTATCGCAGGTATTG
TGATCTCGTTAATTAACATTGTCGGTGGTTTGACTATTGGTGTGGCTATGCACGGCATGGACCTAGCTCAAGCTGCTCAC
GTATACACTCTGTTATCTATCGGTGATGGTTTAGTTTCTCAGATTCCTTCACTACTGATTTCCTTAACTGCTGGTATCGT
TACTACTCGAGTTTCTAGTGATAAAAACACGAACTTAGGTAAAGAGATTTCCTCTCAGTTAGTTAAAGAACCTAGAGCTT
TACTCTTAGCCTCTGCAGCAACTTTAGGCGTGGGCTTTTTTAAAGGGTTCCCACTTTGGTCATTCTCCATACTCTCTCTT
ATCTTTGGTATTCTTGGTGTTATCCTTCTTGCGAAGAAAAACAGTGCTTCTAAACAGGGTGCCTCTGGAGCATCAACAAC
AGTAGGAGCTGCTTCAGACGGAGCTGCAGCAGCTGGAGATAACCCGGATGATTACTCCTTAACGTTGCCAGTAATTTTAG
AATTAGGAAAAGACTTATCTAAGTTGATTCAACAAAAAACGAAGTCTGGTCAAAGTTTCGTTGACGATATGATCCCGAAA
ATGCGTCAAGCTTTGTATCAAGATATTGGTATTCGTTACCCAGGAATTCATGTGCGCACTGACTCTCCTTCTCTAGAGGG
TTATGATTACATGATTCTTCTTAATGAAGTTCCCTACGTTCGAGGAAAAATTCCTGCAAACCATGTGTTAACTAACGAAG
TTGAAGAAAATCTTAAGAGATACAATCTTCCTTTCCTTACTTATAAAAATGCTGCGGGTCTCCCTTCTGCTTGGGTTAGT
GAAGATGCTAAAGCTATTCTAGAAAAAGCAGCTATTAAGTATTGGACACCTTTAGAGGTGATTATTCTTCATCTGTCTTA
CTTCTTCCATAGAAGCTCCCAAGAATTCTTAGGAATTCAAGAGGTACGCTCTATGATTGAATTTATGGAACGCTCGTTCC
CAGATCTTGTTAAAGAAGTTACGCGACTTATCCCTCTGCAAAAGCTTACTGAAATTTTCAAACGTTTAGTCCAAGAGCAG
ATCTCTATCAAAGACCTACGTACAATTTTAGAATCCTTAAGTGAATGGGCTCAAACTGAAAAAGATACTGTATTGCTAAC
TGAATACGTACGTTCTTCTCTGAAACTTTACATTAGTTTCAAATTTTCCCAAGGACAATCTGCAATCTCAGTTTATTTAC
TCGATCCAGAAATTGAAGAGATGATCCGTGGAGCCATTAAACAAACCTCTGCAGGATCTTATCTTGCTTTGGATCCTGAT
TCTGTAAACCTAATCTTAAAATCTATGAGAAATACAATTACGCCAACTCCTCCAGGAGGTCAGCCTCCTGTGCTGTTGAC
AGCAATTGACGTAAGACGATATGTAAGGAAATTAATAGAAACAGAATTCCCTGATATCGCTGTGATTTCTTACCAAGAGA
TTCTCCCAGAGATTCGCATCCAGCCATTAGGAAGAATTCAGATTTTCTAA

Protein sequence :
MNKLLNFVSRTFGGDAALNMINKSSDLILALWMIGVVLMIILPLPPTIVDLMITINLAVSVFLLMVALYIPSALQLSVFP
SLLLITTMFRLGINISSSRQILLKAYAGHVIQAFGDFVVGGNYVVGFIIFLIITIIQFIVVTKGAERVAEVAARFRLDAM
PGKQMAIDADLRAGMIDAQQARDKRGMIQKESELYGAMDGAMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAH
VYTLLSIGDGLVSQIPSLLISLTAGIVTTRVSSDKNTNLGKEISSQLVKEPRALLLASAATLGVGFFKGFPLWSFSILSL
IFGILGVILLAKKNSASKQGASGASTTVGAASDGAAAAGDNPDDYSLTLPVILELGKDLSKLIQQKTKSGQSFVDDMIPK
MRQALYQDIGIRYPGIHVRTDSPSLEGYDYMILLNEVPYVRGKIPANHVLTNEVEENLKRYNLPFLTYKNAAGLPSAWVS
EDAKAILEKAAIKYWTPLEVIILHLSYFFHRSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFKRLVQEQ
ISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLLDPEIEEMIRGAIKQTSAGSYLALDPD
SVNLILKSMRNTITPTPPGGQPPVLLTAIDVRRYVRKLIETEFPDIAVISYQEILPEIRIQPLGRIQIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssD AAO18050.1 LssD Virulence TTSS locus Protein 2e-140 46
YPO0266 YP_002345347.1 secretion system apparatus protein SsaV Virulence Not named Protein 2e-94 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
G5O_0495 YP_005663158.1 type III secretion inner membrane protein SctV VFG2126 Protein 0.0 91
G5O_0495 YP_005663158.1 type III secretion inner membrane protein SctV VFG0384 Protein 2e-140 46
G5O_0495 YP_005663158.1 type III secretion inner membrane protein SctV VFG0064 Protein 4e-143 46
G5O_0495 YP_005663158.1 type III secretion inner membrane protein SctV VFG0198 Protein 3e-129 46