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Name : clpC (CPK_ORF00950) Accession : YP_005661902.1 Strain : Chlamydophila pneumoniae LPCoLN Genome accession: NC_017285 Putative virulence/resistance : Virulence Product : negative regulator of genetic competence ClpC/MecB Function : - COG functional category : - COG ID : - EC number : - Position : 358306 - 360843 bp Length : 2538 bp Strand : - Note : - DNA sequence : ATGTTTGAGAAGTTCACTAATAGAGCAAAACAAGTCATTAAACTGGCGAAAAAGGAGGCTCAGCGTTTAAATCATAACTA CCTGGGTACTGAGCACATCCTGCTTGGTCTTCTCAAACTTGGTCAAGGGGTAGCTGTTAATGTATTACGCAACCTTGGTA TAGATTTTGATACGGCACGGCAAGAGGTGGAACGCCTGATTGGTTATGGTCCAGAAATTCAAGTCTACGGAGACCCTGCC CTTACAGGAAGAGTAAAAAAATCTTTTGAATCAGCAAATGAAGAGGCCAGCCTTTTAGAGCACAATTATGTCGGGACGGA GCATTTACTCTTAGGGATCCTACATCAATCAGATAGTGTCGCTCTTCAGGTATTAGAAAACTTACATATCGATCCAAGAG AGGTTCGTAAGGAAATTCTTAAAGAATTAGAGACCTTCAATCTACAACTTCCTCCTTCGTCGTCGTCTTCTTCCTCATCC TCTCGAAGCAACCCTTCATCTTCAAAATCTCCTTTAGGTCATAGCTTAGGTTCTGACAAAAACGAAAAGCTTTCTGCTCT GAAAGCATATGGTTATGATTTAACGGAGATGTTCCGAGAGTCTAAGCTCGATCCTGTCATTGGTCGTTCTTCAGAAGTCG AACGGTTGATTTTGATTCTTTGCCGAAGAAGAAAAAACAATCCTGTACTTATTGGAGAAGCTGGAGTTGGTAAGACTGCA ATTGTTGAGGGTCTGGCTCAAAAAATCATTCTGAATGAGGTTCCTGATGCCTTACGGAAAAAGCGACTGATTACTCTAGA TCTAGCATTAATGATTGCTGGAACAAAATATCGAGGGCAATTTGAGGAACGGATCAAAGCTGTCATGGATGAAGTTCGCA AGCATGGAAACATCTTGCTCTTCATTGACGAGCTCCACACGATTGTAGGAGCAGGAGCAGCTGAAGGTGCTATCGATGCT TCAAACATTTTAAAACCTGCGTTAGCGCGAGGTGAAATTCAGTGTATTGGAGCAACTACGATAGATGAGTATCGCAAGCA CATAGAAAAAGACGCAGCTTTAGAACGTCGTTTCCAAAAAATCGTGGTTCACCCTCCTAGTGTAGATGAGACTATTGAGA TTTTACGTGGCCTCAAGAAAAAGTATGAAGAACATCACAATGTCTTCATTACTGAAGAAGCTTTAAAAGCAGCTGCGACT CTTTCTGATCAATATGTTCATGGACGTTTCCTCCCTGATAAAGCAATAGATCTTTTAGATGAAGCTGGGGCTCGTGTCCG TGTGAATACAATGGGTCAGCCTACAGATTTAATGAAGCTAGAGGCTGAAATCGAAAATACAAAATTGGCCAAAGAGCAGG CCATTGGAACTCAAGAATACGAAAAAGCTGCAGGTTTACGTGATGAAGAGAAAAAACTTCGCGAACGTCTGCAAAGTATG AAACAGGAATGGGAAAATCATAAAGAAGAGCACCAAGTTCCTGTAGATGAAGAAGCAGTCGCTCAGGTAGTTTCTCTACA AACAGGAATTCCCTCAGCAAGGCTCACAGAAGCTGAAAGTGAGAAGCTTCTGAAGTTAGAAGACACGTTAAGAAGAAAAG TCATTGGTCAAAATGATGCCGTTACCAGCATTTGCCGTGCCATCCGACGTTCTCGAACAGGGATCAAAGATCCTAACCGA CCTACGGGCTCCTTCCTATTCCTTGGGCCTACCGGTGTAGGGAAAAGCCTGCTCGCCCAACAAATTGCTATAGAGATGTT CGGTGGTGAAGACGCTCTGATTCAGGTAGACATGTCAGAGTACATGGAGAAATTTGCTGCTACCAAGATGATGGGATCAC CTCCAGGATATGTAGGTCATGAAGAAGGGGGCCACCTTACGGAACAGGTACGTCGCCGTCCTTACTGCGTTGTTCTCTTT GATGAGATAGAAAAGGCACACCCAGACATTATGGACCTGATGTTGCAAATTTTAGAGCAAGGACGTCTTACTGATTCTTT TGGTCGCAAAGTGGATTTCCGTCATGCCATTATTATCATGACCTCCAATTTGGGAGCTGATCTCATTCGTAAAAGCGGAG AAATTGGTTTTGGCTTGAAGTCCCATATGGACTATAAGGTCATCCAAGAGAAAATCGAACATGCTATGAAGAAACACTTA AAGCCTGAGTTCATTAACCGTTTGGATGAAAGTGTGATTTTCCGTCCCCTCGAGAAAGAATCTCTATCGGAGATCATCCA TTTAGAGATCAACAAACTGGACTCGAGACTGAAAAACTACCAAATGGCTTTGAACATCCCAGACTCTGTGATTTCCTTCC TAGTAACGAAGGGGCATTCTCCAGAAATGGGAGCACGTCCTCTACGCCGTGTCATTGAGCAGTACCTTGAAGATCCTCTA GCGGAGCTCTTGCTTAAAGAGTCCTGCCGTCAAGAAGCTCGCAAGCTACGAGCAACCTTGGTTGAAAATCGCGTTGCCTT TGAAAGGGAAGAAGAGGAGCAGGAAGCTGCTCTCCCTAGCCCTCACTTGGAATCATAG Protein sequence : MFEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRNLGIDFDTARQEVERLIGYGPEIQVYGDPA LTGRVKKSFESANEEASLLEHNYVGTEHLLLGILHQSDSVALQVLENLHIDPREVRKEILKELETFNLQLPPSSSSSSSS SRSNPSSSKSPLGHSLGSDKNEKLSALKAYGYDLTEMFRESKLDPVIGRSSEVERLILILCRRRKNNPVLIGEAGVGKTA IVEGLAQKIILNEVPDALRKKRLITLDLALMIAGTKYRGQFEERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGAIDA SNILKPALARGEIQCIGATTIDEYRKHIEKDAALERRFQKIVVHPPSVDETIEILRGLKKKYEEHHNVFITEEALKAAAT LSDQYVHGRFLPDKAIDLLDEAGARVRVNTMGQPTDLMKLEAEIENTKLAKEQAIGTQEYEKAAGLRDEEKKLRERLQSM KQEWENHKEEHQVPVDEEAVAQVVSLQTGIPSARLTEAESEKLLKLEDTLRRKVIGQNDAVTSICRAIRRSRTGIKDPNR PTGSFLFLGPTGVGKSLLAQQIAIEMFGGEDALIQVDMSEYMEKFAATKMMGSPPGYVGHEEGGHLTEQVRRRPYCVVLF DEIEKAHPDIMDLMLQILEQGRLTDSFGRKVDFRHAIIIMTSNLGADLIRKSGEIGFGLKSHMDYKVIQEKIEHAMKKHL KPEFINRLDESVIFRPLEKESLSEIIHLEINKLDSRLKNYQMALNIPDSVISFLVTKGHSPEMGARPLRRVIEQYLEDPL AELLLKESCRQEARKLRATLVENRVAFEREEEEQEAALPSPHLES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_005661902.1 | negative regulator of genetic competence ClpC/MecB | VFG0079 | Protein | 0.0 | 51 |
| clpC | YP_005661902.1 | negative regulator of genetic competence ClpC/MecB | VFG0080 | Protein | 4e-143 | 50 |
