Gene Information

Name : CJS3_pTet0020 (CJS3_pTet0020)
Accession : YP_005660360.1
Strain :
Genome accession: NC_017282
Putative virulence/resistance : Virulence
Product : type IV secretion system protein VirB11
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 18128 - 19135 bp
Length : 1008 bp
Strand : -
Note : -

DNA sequence : 
ATGTCAATAACGCTAGATAAATACACTCAAAAATATTTCGGAGAATTTTTAAAAGATGATAATATCAATGAAATCTGCTA
TAACGGCGATAATAAAATTTGGGTACAAAACTCCAAAGGATTATGGGAATCTGTACAAACAGAACTTGATTTTGAGTCCG
CAGGACATTTTGCAACTGCTTCAGCCTCTTTTAAAAAAGACAAAATAGATGTATCACGCCCTATTCTTTCTTGTATTTTG
GTAGGCGGAGAGCGTATGCAAATTGTTATTCCGCCTGCTACCAAAAGCGAACATATTTCAATTACTATCAGAAAACCAAG
CAAAACTCGCTTTAAAATGGAAGATCATGTTAAAAGTGGACTTTTCGAAGATTTAAACCCTGATGATAAAAATATAATCA
AACCAAGCGATGAAGAATTAATCAAGTTATATAAAGAAAGAGATTATCAAGCTTTTATATCAAAAGCTGTTAGCTATGGT
AAAAATATCATCATCGCTGGTGAAACTGGCAGTGGTAAAACCACTTTTATGAAAACTCTTATTGATTTCATAAGCCTCGA
TGATCGGATCATAACAATAGAAGATGTTGAAGAAATCAAATTCTACGAACACAAAAATTTCGTGCAATTATTCTATCCGA
GTGAAGCAAAAAGCACAGATTTTTTAAATTCTGCAACGCTTTTAAAATCTTGTCTAAGAATGAAGCCTGACAGAATTTTA
CTTGCAGAGCTTAGAGGTGCGGAAACTTATGATTTTATCAATGTCTTAGCTAGTGGACATGGTGGAAGCATTACAAGTTG
TCATGCAGGAAGTCCTGAAGAAACATTCACACGACTTGCCTTAATGACTTTGCAAAACCCACAAGGTCAATGCGTTCCTT
TTGAAATTATCCAAAAAACACTTAAAGATTTAATTGATATTGTCGTGCATATCCACGCTCATCACGGAAAAAGGCGTATT
AGTGGCATTTATTTTAAAGAAATAGAGAATATCAAATTGGAGAGATAA

Protein sequence : 
MSITLDKYTQKYFGEFLKDDNINEICYNGDNKIWVQNSKGLWESVQTELDFESAGHFATASASFKKDKIDVSRPILSCIL
VGGERMQIVIPPATKSEHISITIRKPSKTRFKMEDHVKSGLFEDLNPDDKNIIKPSDEELIKLYKERDYQAFISKAVSYG
KNIIIAGETGSGKTTFMKTLIDFISLDDRIITIEDVEEIKFYEHKNFVQLFYPSEAKSTDFLNSATLLKSCLRMKPDRIL
LAELRGAETYDFINVLASGHGGSITSCHAGSPEETFTRLALMTLQNPQGQCVPFEIIQKTLKDLIDIVVHIHAHHGKRRI
SGIYFKEIENIKLER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0525 BAD13913.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-56 46
HP0525 AAR03948.1 VirB11-like protein Virulence cag PAI Protein 1e-55 45
virB11-2 YP_005775728.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-55 45
virB11 AGC69807.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-55 45
HP0525 NP_207321.1 virB11-like protein Virulence cag PAI Protein 1e-55 45
HP0525 AAR03917.1 VirB11-like protein Virulence cag PAI Protein 1e-55 45
virB11-4 YP_003728739.1 cag pathogenicity island protein alpha Virulence cag PAI Protein 1e-55 45
HP0525 BAD14024.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-55 45
HP0525 BAD13831.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-55 45
virB11_1 NP_223192.1 cag island protein, DNA transfer protein Virulence cag PAI Protein 9e-56 45
HP0525 AAR03859.1 VirB11-like protein Virulence cag PAI Protein 8e-56 45
HP0525 BAD13941.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-55 45
virB11-2 YP_005774544.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-56 45
HP0525 BAD13886.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-56 45
HP0525 BAD13996.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-55 45
virB11-2 YP_005777269.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-56 45
cag-alfa AAF80196.1 Cag-alfa Virulence cag PAI Protein 1e-55 45
HP0525 AAR03888.1 VirB11-like protein Virulence cag PAI Protein 1e-55 45
virB11-2 YP_005779065.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-55 45
HP0525 BAD13777.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-55 44
HP0525 BAD13804.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-55 44
HP0525 BAD14050.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-55 44
HP0525 BAD13968.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-54 44
HP0525 BAD13858.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-55 43
unnamed AAP70289.1 Pilx11/VirB11-like protein Not tested HPI Protein 1e-58 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CJS3_pTet0020 YP_005660360.1 type IV secretion system protein VirB11 VFG2218 Protein 6e-61 53
CJS3_pTet0020 YP_005660360.1 type IV secretion system protein VirB11 VFG0285 Protein 6e-56 45