Gene Information

Name : fliI (CJS3_0191)
Accession : YP_005658797.1
Strain : Campylobacter jejuni S3
Genome accession: NC_017281
Putative virulence/resistance : Virulence
Product : Flagellum-specific ATP synthase FliI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 187480 - 188865 bp
Length : 1386 bp
Strand : +
Note : -

DNA sequence : 
ATGAATCTTGAAAAACTACGCTCCAAACTTGGTAAAGAAAATTTAAGTGCTATCTTTGGAGAGATTACAAAAATTTCTGC
TACGAGTATAGAAATTCGTGGGCTTAAAACAGGGGTTGGAGATATAGTGAAGCTAGTTTCCAATGAAAATGAAAATTTAA
ACACTCTAGCTATGGTCGTAGAAATCAAGGAACAATTTAGCTATTTAAGCCCTTTTTCTTTTATAGAAGGTTTCAAAATA
GGCGATCGTGCTTTCATAAGTGATGCAGGTATGCAAATAGGCGTTAGCGATGAACTTTTAGGCAGAGTAGTAGATCCTTT
TATGCGCCCAAAAGATGGTAAAGGAGCTATAGAAGTAACCAAATATATGCCTATAATGCGTGCACCTATTGATGCCATGA
AAAGAGGGCTTATAGAAGAAGTTTTTCCCGTGGGTGTTAAAACCATAGACGCGCTTTTAACTTGTGGTGTAGGACAAAAA
CTTGGTATTTTTGCAGGAAGTGGGGTAGGAAAATCCACTCTTATGGGAATGATAGTTAAAAATTCCAAAGCTCCTATAAA
AGTAGTGGCACTCATAGGAGAAAGGGGGCGTGAAATTCCTGAATTTATACAAAAAAATTTAGGCGGAAAGCTCGATGATA
CAGTGATTATTGTTGCTACAAGTGATGATAGTGCTTTGATGCGTAAATACGGTGCTTTTTGCGCAATGAGTGTGGCAGAA
TACTTTAAAGAACAGGGCAAAGATGTACTTTTTATCATGGATAGTGTAACGCGTTTTGCTATGGCACAAAGAGAAATTGG
ACTAGCTCTTGGAGAGCCTCCTACAACCAAAGGTTATCCGCCAAGTGTTTTAAGTCTTTTGCCTCAACTCATGGAAAGAA
CCGGTAAAGAAGAAGGTAAAGGCACTATAACAGCCTTTTTTACCGTTTTAGTGGATGGTGATGATATGAGCGATCCAATC
GCCGATCAAAGTCGTTCTATCTTAGATGGACACATTGTTTTAAGTCGTGAATTAACAGACTTTGGAATTTATCCTCCTAT
TAATATACAAAACTCTGCTTCAAGGGTGATGAGTGACATTATAAGTCCTGAACATAAACTTTGGGCAAGAAAATTTAAGC
GTTTAAACTCGCTTTTAAAAGAAAATGAAGTATTGCTTCGCATCGGTGCTTATCAGAAAGGAAGTGATAAAGAACTTGAT
GAAGCTATTTCTAAAAAAGAATTTATGCAAAAATTCTTAGGACAAAATCCTGAAGAAAGCTTCGAATTTAATCAAACTTT
AGAGCTTTTAAGTCAAATTGATACACCAAATACTCCTTTGCCACCAACTCAAAATATAAATGTAGGAAGTGCAAGTGCAA
CCTTGCCTAATCCTAATTTAAAATAA

Protein sequence : 
MNLEKLRSKLGKENLSAIFGEITKISATSIEIRGLKTGVGDIVKLVSNENENLNTLAMVVEIKEQFSYLSPFSFIEGFKI
GDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGAIEVTKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQK
LGIFAGSGVGKSTLMGMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCAMSVAE
YFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTGKEEGKGTITAFFTVLVDGDDMSDPI
ADQSRSILDGHIVLSRELTDFGIYPPINIQNSASRVMSDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELD
EAISKKEFMQKFLGQNPEESFEFNQTLELLSQIDTPNTPLPPTQNINVGSASATLPNPNLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-84 46
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 2e-79 46
ECs4568 NP_312595.1 EscN Virulence LEE Protein 2e-79 46
escN AAK26715.1 EscN Virulence LEE Protein 2e-78 46
escN AAL57542.1 EscN Virulence LEE Protein 2e-78 46
unnamed AAL06369.1 EscN Virulence LEE Protein 2e-78 46
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 1e-78 46
escN CAI43874.1 EscN protein Virulence LEE Protein 7e-79 46
escN YP_003223475.1 translocator EscN Virulence LEE Protein 9e-79 46
escN CAC81862.1 EscN protein Virulence LEE II Protein 7e-79 46
escN YP_003236088.1 translocator EscN Virulence LEE Protein 3e-79 46
escN AAC31513.1 L0034 Virulence LEE Protein 2e-79 46
escN NP_290268.1 hypothetical protein Virulence LEE Protein 2e-79 46
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 4e-74 46
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 4e-74 46
escN AAC38383.1 EscN Virulence LEE Protein 1e-79 45
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-67 43
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 9e-68 43
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-68 43
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 7e-68 43
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 3e-67 43
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-81 43
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 3e-82 43
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 3e-82 43
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-82 43
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 1e-81 42
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-81 42
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 4e-82 42
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-81 42
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-81 42
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 7e-73 42
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 5e-60 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_005658797.1 Flagellum-specific ATP synthase FliI VFG0390 Protein 4e-87 46
fliI YP_005658797.1 Flagellum-specific ATP synthase FliI VFG0812 Protein 1e-79 46
fliI YP_005658797.1 Flagellum-specific ATP synthase FliI VFG0192 Protein 4e-84 45
fliI YP_005658797.1 Flagellum-specific ATP synthase FliI VFG0730 Protein 7e-80 45
fliI YP_005658797.1 Flagellum-specific ATP synthase FliI VFG1254 Protein 7e-78 45
fliI YP_005658797.1 Flagellum-specific ATP synthase FliI VFG2331 Protein 1e-75 44
fliI YP_005658797.1 Flagellum-specific ATP synthase FliI VFG0048 Protein 1e-80 44
fliI YP_005658797.1 Flagellum-specific ATP synthase FliI VFG0515 Protein 4e-68 43
fliI YP_005658797.1 Flagellum-specific ATP synthase FliI VFG2499 Protein 2e-75 43
fliI YP_005658797.1 Flagellum-specific ATP synthase FliI VFG2144 Protein 3e-78 42
fliI YP_005658797.1 Flagellum-specific ATP synthase FliI VFG1008 Protein 2e-59 42