Gene Information

Name : peb3 (CJM1_0272)
Accession : YP_005657249.1
Strain : Campylobacter jejuni M1
Genome accession: NC_017280
Putative virulence/resistance : Virulence
Product : Major antigenic peptide PEB3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 268289 - 269041 bp
Length : 753 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAAATTATTACTTTATTTGGTGCATGTGCCTTAGCTTTTAGTATGGCAAATGCAGATGTAAATCTTTACGGACC
AGGTGGCCCACACACGGCCTTAAAAGATATAGCAAACAAATATAGCGAAAAAACAGGCGTTAAAGTAAATGTAAATTTTG
GCCCTCAAGCGACTTGGTTTGAAAAGGCTAAAAAAGATGCAGATATTTTATTTGGCGCTTCAGATCAATCGGCTTTAGCT
ATAGCGAGTGATTTTGGAAAAGATTTTAATGTGAGTAAAATCAAGCCTTTATATTTTAGAGAAGCCATCATACTTACTCA
AAAAGGCAATCCTTTAAAAATCAAAGGTTTAAAAGATTTGGCTAATAAAAAAGTAAGAATCGTTGTGCCTGAAGGTGCTG
GAAAGAGCAATACTTCTGGAACTGGAGTTTGGGAAGATATGATAGGTAGAACTCAAGATATAAAAACCATACAAAATTTT
AGAAACAATATCGTGGCCTTTGTTCCAAATAGTGGAAGTGCAAGAAAGCTTTTCGCACAAGATCAAGCCGATGCTTGGAT
CACTTGGATTGACTGGTCAAAAAGCAATCCTGATATAGGAACTGCCGTAGCTATAGAAAAAGATTTGGTTGTTTATAGAA
CTTTTAATGTGGTAGCTAAAGAAGGTGCGAGCAAAGAAACACAAGATTTTATTGCTTATTTAAGTTCTAAGGAAGCTAAA
GAAATTTTTAAAAAATACGGCTGGAGAGAATAA

Protein sequence : 
MKKIITLFGACALAFSMANADVNLYGPGGPHTALKDIANKYSEKTGVKVNVNFGPQATWFEKAKKDADILFGASDQSALA
IASDFGKDFNVSKIKPLYFREAIILTQKGNPLKIKGLKDLANKKVRIVVPEGAGKSNTSGTGVWEDMIGRTQDIKTIQNF
RNNIVAFVPNSGSARKLFAQDQADAWITWIDWSKSNPDIGTAVAIEKDLVVYRTFNVVAKEGASKETQDFIAYLSSKEAK
EIFKKYGWRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
acfC AAK20768.1 accessory colonization factor AcfC Virulence VPI Protein 1e-57 54
acfC AAK20798.1 accessory colonization factor AcfC Virulence VPI Protein 1e-57 54
acfC AAA82706.1 AcfC Virulence VPI Protein 1e-57 54
acfC YP_001216322.1 accessory colonization factor AcfC Virulence VPI-1 Protein 2e-57 54
VC0841 NP_230489.1 accessory colonization factor AcfC Virulence VPI-1 Protein 2e-57 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
peb3 YP_005657249.1 Major antigenic peptide PEB3 VFG0105 Protein 9e-58 54
peb3 YP_005657249.1 Major antigenic peptide PEB3 VFG0839 Protein 7e-58 52