Gene Information

Name : TCCBUS3UF1_9100 (TCCBUS3UF1_9100)
Accession : YP_005654029.1
Strain : Thermus sp. CCB_US3_UF1
Genome accession: NC_017278
Putative virulence/resistance : Virulence
Product : ATPase AAA-2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 897788 - 899998 bp
Length : 2211 bp
Strand : -
Note : similar to ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones COG0542; similar to ATPase AAA-2 of Deinococci UniRef RepID=Q1IZ22_DEIGD

DNA sequence :
ATGAACAGGTACGACGATCGCGCCAGGCTGGTCTTTCACTACGCAAGGGAGGAGGGGAGCCGCTTAGGCCACTCCATGAT
CGGCCCAGAGCACCTCCTCCTGGGCCTGATGCGCGAAGGGGGGACCGCGGCCCGCATCCTCCAGGAGTACGGGGCGAGCC
TCGAGGCCATGCGCCGCATGGTGGAGGAGCTGGTGGGCCGGGGGGAGGGGAGCCGCACGGGTGAGCCCCCGGCCATCACC
CCCAGGGCCCGGCGGGTCATGGAGCTGGCCAGCGCCGAGGCCCGCAACATGGGGGCCGCCGTGATCGGCACCGAGCACAT
CCTCCTGGGCATCATCCGCGAGGGGGACGGGATCGCTTACCGCATCCTCTCCCACTTCGCCAAGGACGTGGACGCCATCC
GCTGGCGCATCCTCTCCATGGCCGAGGGCCGGGAACGGGAAAAGCCGGTGAACACCCCCTTCCTGGACGAGTACGGCCGC
GACCTCACCAAGGAGGCCCGGGAGGGGAAGCTGGACCCGGTGATCGGCCGCCAGGAGGAGATCAACCGGGTGATCCAGAT
CCTGGCCCGGCGCACCAAGAACAACCCGGTGCTCATCGGCGACCCTGGGGTGGGCAAAACGGCCATTGTGGAGGGCCTGG
CCCAGGCCATCGTGGAGGGGCGGGTGCCCCCCATCCTGCGGGGGGCCCGGGTGGTGGCCATCGACCTGGCCGGGGTGGTG
GCGGGCACCAAGTACCGGGGGGAGTTTGAGGAGCGGCTGCGCCAGATCATTGAAGAGCTGAAAAACGCCAAGGTTATCGC
CTTCATCGATGAGCTCCACACCCTGATCGGGGCGGGCGGGGCCGAGGGCACTCTGGACGCGGCCAACATCCTCAAGCCCG
CGCTGGCCCGGGGGGAGATCCAGGTGATCGGGGCCACCACCACCGGGGAGTACCACCGCTACATCGAGAAGGACGCCGCC
CTGGAGCGGCGCTTCCAGCCCGTGATCGTCCTGGAGCCCTCCCCGGAGGAAACCCTGGAGATCCTCAAGGGCCTCCGCCC
CCGCTACGAGGCCCACCACGGGGTCATCATCCCCGACGAAATCCTGGAGCTTTCCGTCAAGATCGGCATCCGCTCCCTCC
CCGGGCGGAACTTTCCCGACAAGGCCATAGACCTCATCGACGAGGCCGCAAGCCGGGTGCGCCTCAACGCCTCCTTGGGT
CTGCCCGTGGCCGAGGAGGAGGACGGCACCCCCGTGGTCACCCGGGAGGACATCGAGGCGGTGGTGGACTCCTGGGGTGG
GGTGTACGTGGACGACAAGGACGACGAGAAGCTCATGCGCCTGGAGGAGGAGCTGAAAAAGCGGGTGGTGGGCCAGGAGG
AGGCCATCCGCGCCCTGGCCAGCGCCCTGCGCCGGGCCCGGGTGGGCCTGGGGGGGAGGACCCGGGTGGCGGCGAGCTTC
CTCTTCGTGGGCCAAAGCGGGGTGGGCAAAACCCAGCTGGCCAAGGCCCTGGCCGAGGTCCTCTTTGGCTCGGAAAGGGC
CCTCATCCGCTTTGACATGTCCGAGTTCCAGGAACCCCACTCCATCTCCAAGCTCATCGGGGCCCCGCCAGGGTACGTGG
GCTACGAGCAGGGGGGGCGGCTCACCGAGGCCGTGCGCCGCCAGCCCTTCAGCGTGGTCCTCCTGGACGAGATTGAGAAG
GCGCACCCCGACGTGTACAACACCTTCCTCCAGGTCCTGGACGAGGGCCGCCTCACGGACGGCATGGGGCGCACCGTGGA
CTTCCGCCGGGTGATCCTCATCATGACCTCCAACACCGGCTACAACGTGGGCCCCGCCATCGGCTTCACCAGCCGGGAGG
TGGACACCGAGTCCCCCCTCAAGGCCCTCTTCACCCCCGAGTTCCTGGACCGCCTGGACGAGGTGATCCGCTTCCGGCCC
CTCACCGAGGAGGAGCTGGTCCAGGTGGCTGGGCTCATGCTGGACGAAATCCAGAAGGAGCTGAAGAGCCGGGAGATCGA
GGTCGCCTTCGCCCCCGAGGTGGCCCGGTTCGTGGTGGACCAGGCCCCCAAGACGGGGAGCGCCCGGGCCATCCGCGGGG
TCATCCGGGAGCGCATCGAGGACCCCCTGTCCCTGGCCCTCCTGAAAAAACCCTCTGGCCGCCTCCTGGTGAGCGTGGAG
GACGGGCACCTCACCTTCCACGAGGTGGAGGGGGAGGAACTCCTGGTCTAA

Protein sequence :
MNRYDDRARLVFHYAREEGSRLGHSMIGPEHLLLGLMREGGTAARILQEYGASLEAMRRMVEELVGRGEGSRTGEPPAIT
PRARRVMELASAEARNMGAAVIGTEHILLGIIREGDGIAYRILSHFAKDVDAIRWRILSMAEGREREKPVNTPFLDEYGR
DLTKEAREGKLDPVIGRQEEINRVIQILARRTKNNPVLIGDPGVGKTAIVEGLAQAIVEGRVPPILRGARVVAIDLAGVV
AGTKYRGEFEERLRQIIEELKNAKVIAFIDELHTLIGAGGAEGTLDAANILKPALARGEIQVIGATTTGEYHRYIEKDAA
LERRFQPVIVLEPSPEETLEILKGLRPRYEAHHGVIIPDEILELSVKIGIRSLPGRNFPDKAIDLIDEAASRVRLNASLG
LPVAEEEDGTPVVTREDIEAVVDSWGGVYVDDKDDEKLMRLEEELKKRVVGQEEAIRALASALRRARVGLGGRTRVAASF
LFVGQSGVGKTQLAKALAEVLFGSERALIRFDMSEFQEPHSISKLIGAPPGYVGYEQGGRLTEAVRRQPFSVVLLDEIEK
AHPDVYNTFLQVLDEGRLTDGMGRTVDFRRVILIMTSNTGYNVGPAIGFTSREVDTESPLKALFTPEFLDRLDEVIRFRP
LTEEELVQVAGLMLDEIQKELKSREIEVAFAPEVARFVVDQAPKTGSARAIRGVIRERIEDPLSLALLKKPSGRLLVSVE
DGHLTFHEVEGEELLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 3e-129 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TCCBUS3UF1_9100 YP_005654029.1 ATPase AAA-2 VFG0080 Protein 4e-122 49
TCCBUS3UF1_9100 YP_005654029.1 ATPase AAA-2 VFG0079 Protein 1e-135 45