Gene Information

Name : TCCBUS3UF1_8990 (TCCBUS3UF1_8990)
Accession : YP_005654017.1
Strain : Thermus sp. CCB_US3_UF1
Genome accession: NC_017278
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 884012 - 886318 bp
Length : 2307 bp
Strand : -
Note : similar to ATP-dependent DNA helicase RecG PRK10917; similar to ATP-dependent DNA helicase RecG of Bacteria UniRef RepID=D7BEZ9_9DEIN

DNA sequence :
ATGGGGAGCGTGAGGGAAGGGGAGCTTAGGGAAAGGCTCCTAAGGCCCATCCTCCGGGAGCTGAAGGATGGGGCCAAGGA
CCAGGTGGTGGTGGGGGGCCTCGAGGGCCTGGTGCGGAACCTGGCCCGCCCCTTTCCCGAGCTCCTCAGCCTCTTCCAGG
GCTATGGGGAAAAGGCCCCCGAGGAAAGGCGGCGGATCCTGGAGGAGGCCATCCGCTTCCTGCAAGATGGCGCCCCGCCC
CCCCCTGCCCCCAAGCCCCCGGGAAGCCTCTCCCCCGAGGACCCCGCCCACCTCCTCGCCCCCCCCCAGGGCCGGAAAAA
GCTGGCCGAGCTGGCCCTGCGCACGGTGCGGGACGTGCTCCACTACTACCCCCGCCGCTACGAGGACCGCCGGGCCCTGC
CCGGGGTGCGCTTCCTGGAGGAAGGCCAGAAGGCCACCCTGGCGGTGAAGGTCCTGGCCAAGGAGCTCCTCAAGACCCCC
AAAAAGGGAATGCAGCTGGTCCAGGTGCGGGCCCAGGACGCCTGGGGGTGGCGGCTCACCCTGGTCTGGTTCAACCAGCC
CTGGGTCCTGTCCCAGGTGGAGGTGGGGGCCACCCTGATCGTCACCGGGCGGGTGCAGCGGCGGGGCGGGGTGCAGCTTC
TGGTGGAGCACTTTGAGGACGAGGGCACCGAGTCCCTTTCCACCGGGCGCATCGTCCCCATCTACCCCGCCAAGGAGGGC
ATAGGCCAGGCCTTCCTGCGGCGCACCGTCCACCAGGCCCTGCAAAGGGCCCTCCCCCTCCCCGATCCCCTGGCCCCCTA
CCGGGAGGCGGAAGGGCTTGGGGACTACTCCGAGGCCCTAAGGGCCATCCACTTCCCCGAGGACGAGGAGGCCCTCAAGC
GGGCCCTCCTCCGCCTCAAGTTCCAGGAGTACCTCCTTCTGGAAATCAAGGCCCTCCTGGACGCCGGGGGGATGGTCTTG
GGCCGGAGCTTCCGGGTGGAGGAGGCCTGGGTGGAGGCCTTCAAGGAGGCCCTGCCCTTCCCCCTCACCCGGGCCCAGGA
AAGGGTTATGGGGGAGATCGCCTCCGACATGCAAAGCCCCAGGCAGATGGCCCGCCTCCTCCAGGGGGACGTGGGCTCGG
GGAAGACGGTGGTGGCGGCCTTCGCCCTTTACCTGGCGGCGCAAAACGGGGCCCAGGGGGCCCTCATGGCCCCCACGGAG
ATCCTGGCCAAGCAACACCACCAAAACCTCACCCGCTACCTCTTCCCCTTGGGGGTGCGGGTGGAACTCCTCCTGGGCTC
CATGACCCTCAGGGAGAAGGAGGCCGTCCTGGACCGCTTGGCCTCGGGAGAGGCCCAGGTGGCCGTGGGCACCCATGCCC
TGATCCAGGAGAAGGTGGGCTTCCGGGACCTGGGCCTGGCGGTGGTGGACGAGGAGCACCGCTTCGGCGTCCTGCAGCGG
CGGGCCCTTCTCAAGCTGGCCCGGGTGCCCCCGGACGTCCTGGTCATGTCCGCCACCCCCATCCCCCGCTCCCTGGCCCT
CACCCTCTACGGGGACCTGGAGGTGAGCCTCCTGGACGAGATGCCCCCGGGGCGCATCCCGGTGAAGACCAAGGTCCTCC
CCCACCGCCTCCGCCTCCAGGCCTACGCCTTCGCCCGGGAGGAGGTGCGCAAGGGGCACCAGGTCTTCGTGGTGGCCCCG
GCCATTGAGGAATCAGAGGAGCTGGACCTCAAGGCCGCCACCACCCTGTTTGAGGAGCTAAGGGGCCTCCTCCCCGGGGT
GCGCATGGCCCTCCTCCACGGGAAGATGCCCGCCCGGGAAAAGGATGCCGTGATGGAGGCCTTCCGCCAGGGGGCCTTTG
ACCTTCTGGTCTCCACCACGGTGATCGAGGTGGGGGTGGACATCCCCCGGGCAAGCCTGATCATCGTGGAGAACGCGGAG
CGCTTCGGCCTGGCGCAACTCCACCAGCTCCGGGGACGGGTGGGGCGGGGGGGCCTCGAGGGCTACGCCATCCTCATCGC
CGGGGAGGCAAGCCAGAAGACCCTCAAGCGCCTCAAGGTGCTGGAGGCCTCCACGGACGGCTTCTACATCGCCGAGATGG
ACCTGAAGCTGCGCGGCCCCGGGGAGCTGAGGGGCACCCGCCAGTCCGGCTACCCCGAGCTGAAGCTGGGGGACCTGGCG
GAGGACACTGGGATCATTGAGCGGGCCCGGGCCCTGGCCAAGCGCATCCTGGAGGAGGACCCGGACCTCTCCCGCCCCGA
GCACCGGGCCCTCAAGGAGGAGCTCCGGGCCCAGGCCGAGCGCATCGGTTTCCGCGAAGTCATCTGA

Protein sequence :
MGSVREGELRERLLRPILRELKDGAKDQVVVGGLEGLVRNLARPFPELLSLFQGYGEKAPEERRRILEEAIRFLQDGAPP
PPAPKPPGSLSPEDPAHLLAPPQGRKKLAELALRTVRDVLHYYPRRYEDRRALPGVRFLEEGQKATLAVKVLAKELLKTP
KKGMQLVQVRAQDAWGWRLTLVWFNQPWVLSQVEVGATLIVTGRVQRRGGVQLLVEHFEDEGTESLSTGRIVPIYPAKEG
IGQAFLRRTVHQALQRALPLPDPLAPYREAEGLGDYSEALRAIHFPEDEEALKRALLRLKFQEYLLLEIKALLDAGGMVL
GRSFRVEEAWVEAFKEALPFPLTRAQERVMGEIASDMQSPRQMARLLQGDVGSGKTVVAAFALYLAAQNGAQGALMAPTE
ILAKQHHQNLTRYLFPLGVRVELLLGSMTLREKEAVLDRLASGEAQVAVGTHALIQEKVGFRDLGLAVVDEEHRFGVLQR
RALLKLARVPPDVLVMSATPIPRSLALTLYGDLEVSLLDEMPPGRIPVKTKVLPHRLRLQAYAFAREEVRKGHQVFVVAP
AIEESEELDLKAATTLFEELRGLLPGVRMALLHGKMPAREKDAVMEAFRQGAFDLLVSTTVIEVGVDIPRASLIIVENAE
RFGLAQLHQLRGRVGRGGLEGYAILIAGEASQKTLKRLKVLEASTDGFYIAEMDLKLRGPGELRGTRQSGYPELKLGDLA
EDTGIIERARALAKRILEEDPDLSRPEHRALKEELRAQAERIGFREVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 7e-85 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TCCBUS3UF1_8990 YP_005654017.1 ATP-dependent DNA helicase RecG BAC0356 Protein 5e-79 41