Gene Information

Name : TCCBUS3UF1_7290 (TCCBUS3UF1_7290)
Accession : YP_005653851.1
Strain : Thermus sp. CCB_US3_UF1
Genome accession: NC_017278
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 716266 - 716946 bp
Length : 681 bp
Strand : +
Note : similar to Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain COG0745; similar to Transcriptional regulatory protein of Bacteria UniRef RepID=Q72HX2_THET2

DNA sequence : 
ATGCCCACGATCCTGGTGGTGGACGATGAGCCGGCTTTCCGCGAGATGGTGAGCCGCCTCCTGGAACAGGAAGGGTACAG
GATCCTCCAGGCGGAAAACGGGGAGGAGGCTTTGGGGCTTTTGGGCCGGGCAGACCTGGTGGTCTTGGACATCAACATGC
CCAAGCTGAACGGTTTGGAGCTTCTGGAGATCATCCGCGAGTACGATCGGGAACTGCCCGTGCTCATGCTCACCGCTTAC
GACAAGGAAGAGGACCGGGTGACGGGCCTCACCCTGGGTGCCGACGATTACATGGGCAAGCCTCTGCGGGCCCGGGAGTT
CTTGGCCCGGGTGAAGGCCCTTTTGCGGCGCTCGAAGCGCTTTGAGGTCCTGCGGGTAGGATCGTTGGAGCTAGATCCCT
TCACGGAGGAAGCCCGCCTGGAAGGCAGGCTTTTGGACCTTTCCTCCACCGAGTTCCGCCTTCTTTTGGCTTTGGCCCGT
CACCCTGGGGCTACCCTTCCCCGCGCCCACCTCTTCGCCCAGGTCTGGGGTTTGGAGGAGGAAGTAGACGAGAGGGTAGT
AGACACCACCGTGGCGCGCCTGCGGAAAAAACTTGGAGATAACCCTAAAAATCCCCGTTACATCGCCACGGTCTTTGGCC
GGGGTTACCGCCTTCTGGTGGACCAGGGGGCATCGCCTTGA

Protein sequence : 
MPTILVVDDEPAFREMVSRLLEQEGYRILQAENGEEALGLLGRADLVVLDINMPKLNGLELLEIIREYDRELPVLMLTAY
DKEEDRVTGLTLGADDYMGKPLRAREFLARVKALLRRSKRFEVLRVGSLELDPFTEEARLEGRLLDLSSTEFRLLLALAR
HPGATLPRAHLFAQVWGLEEEVDERVVDTTVARLRKKLGDNPKNPRYIATVFGRGYRLLVDQGASP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-16 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TCCBUS3UF1_7290 YP_005653851.1 transcriptional regulatory protein NC_012469.1.7685629. Protein 2e-29 44
TCCBUS3UF1_7290 YP_005653851.1 transcriptional regulatory protein CP001485.1.gene721.p Protein 3e-31 43
TCCBUS3UF1_7290 YP_005653851.1 transcriptional regulatory protein NC_002952.2859905.p0 Protein 5e-29 42
TCCBUS3UF1_7290 YP_005653851.1 transcriptional regulatory protein NC_007793.3914279.p0 Protein 4e-29 42
TCCBUS3UF1_7290 YP_005653851.1 transcriptional regulatory protein NC_003923.1003749.p0 Protein 4e-29 42
TCCBUS3UF1_7290 YP_005653851.1 transcriptional regulatory protein NC_002745.1124361.p0 Protein 4e-29 42
TCCBUS3UF1_7290 YP_005653851.1 transcriptional regulatory protein NC_009782.5559369.p0 Protein 4e-29 42
TCCBUS3UF1_7290 YP_005653851.1 transcriptional regulatory protein NC_002951.3237708.p0 Protein 4e-29 42
TCCBUS3UF1_7290 YP_005653851.1 transcriptional regulatory protein NC_007622.3794472.p0 Protein 4e-29 42
TCCBUS3UF1_7290 YP_005653851.1 transcriptional regulatory protein NC_002758.1121668.p0 Protein 4e-29 42
TCCBUS3UF1_7290 YP_005653851.1 transcriptional regulatory protein NC_009641.5332272.p0 Protein 4e-29 42
TCCBUS3UF1_7290 YP_005653851.1 transcriptional regulatory protein NC_013450.8614421.p0 Protein 4e-29 42
TCCBUS3UF1_7290 YP_005653851.1 transcriptional regulatory protein NC_002695.1.915041.p Protein 6e-26 41
TCCBUS3UF1_7290 YP_005653851.1 transcriptional regulatory protein CP000034.1.gene3834. Protein 6e-26 41
TCCBUS3UF1_7290 YP_005653851.1 transcriptional regulatory protein CP001138.1.gene4273. Protein 2e-26 41
TCCBUS3UF1_7290 YP_005653851.1 transcriptional regulatory protein CP001918.1.gene5135. Protein 6e-22 41
TCCBUS3UF1_7290 YP_005653851.1 transcriptional regulatory protein CP004022.1.gene3215. Protein 7e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TCCBUS3UF1_7290 YP_005653851.1 transcriptional regulatory protein VFG1389 Protein 3e-24 43
TCCBUS3UF1_7290 YP_005653851.1 transcriptional regulatory protein VFG1390 Protein 4e-28 42