Gene Information

Name : TCCBUS3UF1_40 (TCCBUS3UF1_40)
Accession : YP_005653128.1
Strain : Thermus sp. CCB_US3_UF1
Genome accession: NC_017278
Putative virulence/resistance : Virulence
Product : Pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4132 - 5556 bp
Length : 1425 bp
Strand : +
Note : similar to pyruvate kinase PRK06247; similar to Pyruvate kinase of Deinococci UniRef RepID=Q1J2H5_DEIGD

DNA sequence : 
ATGCTGCCTTTTAAACGCACCAAGATCGTGGCCACCCTGGGGCCCGCCTCCAGCAGCAAGGAGGCCATCCGGGCCCTGGC
CGAGGCGGGGGCCGATGTCTTCCGCCTGAACTTCAGCCACGGTACCCCCGAGGACCACCGCCAGCGGGTGGCCTTGGTGC
GGGAGGTGGCCCAGGAGCTGGGCCGGCCCCTGGCCATCCTGCAGGACCTCCAGGGGCCCAAGATCCGCATTGGCCGCTTC
CGGGAGGGACGGGTGGAGCTCAAGGCGGGCCAGCCCTTCGTCCTCACCCGCGAGCCCATTGAAGGGGACCAGGGCCGGGT
ATCCCTCACCTACGGGGGGCTACCCGAGGACGTGAGCCCAGGCCAGCTCCTCCTCCTGGACGATGGCCGCCTGCGCCTGC
GGGTGGAGGCCGTGCGGGGGGACGAGATCCACACCGTGGTGGAGGTGGGAGGCGTCCTCTCGGACCACAAGGGCATCAAC
GTCCCCGGGGCCGACCTCTCCATCCCTGCCCTTTCGGAGAAGGACATCCAGGACGTGGCCCTGGGGGCAGAGCTGGGAGT
GGACTGGGTGGCGGTTTCTTTCGTGCGCACCCGGGACGACCTCCTCCTGGCCCGCCACTACCTGGCCCGCTACGGCTCCC
GGGCCAAGCTCATGGCCAAGATCGAGAAGCCCTCCGCCGTCCACCGCTTTGAGGAGATCCTGGAGGAGGCGGACGGGATC
ATGGTGGCCCGGGGGGACCTGGGGGTGGAGATGCCCTTGGAGGAGGTGCCCATCGTGCAAAAGCGCCTCATCCTCCGCTG
CATCGCCGCCGGGAAGCCGGTGATCACCGCCACCCAGATGCTGGAATCCATGGTGCACAACCCAAGCCCCACCCGGGCCG
AGGCCTCCGACGTGGCCAACGCCATCTTTGACGGCTCCGATGCGGTGATGCTCTCGGCGGAAACCGCCGCCGGGGCCTAT
CCCGTGGAGGCGGTGGCCATGATGGCCCGCATCGCCCGGGTGGTGGAGTCCTCCCCGGAGTTTCTGCAGAAGCTCAACGT
CCTCCGCCCCGCCCCCACCCCCACTACCCAAGACGCCATCGCCCAGGCCGCGGACGACGTGGTGGAGGCGGTGGGGGCCC
GGGCCATCGTGGTCTTTACCGCCACCGGGGGCTCGGCCCGGCGCATCGCCCGCACCCGGCCCCAGGTCCCCATCCTGGCC
CTCACCCCGAACCCCGAGGTGCAAAGGCAGCTGGCCCTGGTCTGGGGGGTTCTGCCCCAGCTGGCCCCCGACCCCCGGGA
TACCGACGACATGGTGCGCATCGCCCTGGAGAAGGTGAAGGCCTCTGGCCTGGCCCAGGTGGGGGAGCGGGTGGTCATCG
CCGCGGGGGTGCCCTTCGGGGTCCGGGGGACCACCAACCTCCTGCGGGTGGAGCGGGTGAGCTAG

Protein sequence : 
MLPFKRTKIVATLGPASSSKEAIRALAEAGADVFRLNFSHGTPEDHRQRVALVREVAQELGRPLAILQDLQGPKIRIGRF
REGRVELKAGQPFVLTREPIEGDQGRVSLTYGGLPEDVSPGQLLLLDDGRLRLRVEAVRGDEIHTVVEVGGVLSDHKGIN
VPGADLSIPALSEKDIQDVALGAELGVDWVAVSFVRTRDDLLLARHYLARYGSRAKLMAKIEKPSAVHRFEEILEEADGI
MVARGDLGVEMPLEEVPIVQKRLILRCIAAGKPVITATQMLESMVHNPSPTRAEASDVANAIFDGSDAVMLSAETAAGAY
PVEAVAMMARIARVVESSPEFLQKLNVLRPAPTPTTQDAIAQAADDVVEAVGARAIVVFTATGGSARRIARTRPQVPILA
LTPNPEVQRQLALVWGVLPQLAPDPRDTDDMVRIALEKVKASGLAQVGERVVIAAGVPFGVRGTTNLLRVERVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-70 45
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-70 45
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-70 45
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 4e-70 45
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 6e-58 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TCCBUS3UF1_40 YP_005653128.1 Pyruvate kinase VFG0479 Protein 8e-71 45