Gene Information

Name : TCCBUS3UF1_19360 (TCCBUS3UF1_19360)
Accession : YP_005655048.1
Strain : Thermus sp. CCB_US3_UF1
Genome accession: NC_017278
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1944217 - 1944897 bp
Length : 681 bp
Strand : +
Note : similar to lipoprotein transporter ATP-binding subunit PRK11629; similar to ABC transporter related protein of Meiothermus UniRef RepID=D3PQ77_MEIRD

DNA sequence : 
ATGCTGCGGGCCGAAGGCCTTACCAAGCGTTACCGGCAAGGGGAAAAGGAGGTGGTGGCCCTCTCGGGCTTCACCTACAC
CTTCCCCCAAGGGTCCACCGCGGTGGTGGGCCCCTCAGGAAGCGGCAAGACCACCCTTTTGAACCTGCTGGCAGGCTTTG
ATCTGCCCACGGAAGGCGGGGTATTCCTAGGGGAAAAGGCCCTGCACCGGCTCCCCGAGGATGCCCGGGCCGAGGTGCGC
CTCAGGTCCATGGGCTTTGTTTTCCAGCAATGGAACCTCATCCCCACCCTAAGCGCCTGGGAGAACGTGGCCTTCCCCCT
CCTCCTGGCGGGCTGGCCCAGGCCAAAGCGGGAGGCCCGAGCCAAGGAGCTCCTGGAACGGGTGGGCCTGGCCCACCGCC
TGCACCACCTCCCGAGCCGCCTTTCCGGGGGGGAACAGCAACGGGTGGCCCTGGCCCGGGCCCTGGCCCTGGACCCGCCC
ATCCTTTTTGCCGACGAACCCACGGGCAACCTGGACGCCGAGTCCCGGGAGCAGGTGGCGGCCCTCCTCTTCCAGGCGGG
CAAGGAGAGGACCCTCATCCTGGTCACCCATGACCTGGAGCTGGCCGCCCGGGCAGACCGGGTCCTGCACCTGAAGGGGG
GGCGGCTGGTGCGGGAGGAGGTGGCCCAGCCCTCCCGCTAG

Protein sequence : 
MLRAEGLTKRYRQGEKEVVALSGFTYTFPQGSTAVVGPSGSGKTTLLNLLAGFDLPTEGGVFLGEKALHRLPEDARAEVR
LRSMGFVFQQWNLIPTLSAWENVAFPLLLAGWPRPKREARAKELLERVGLAHRLHHLPSRLSGGEQQRVALARALALDPP
ILFADEPTGNLDAESREQVAALLFQAGKERTLILVTHDLELAARADRVLHLKGGRLVREEVAQPSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-29 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TCCBUS3UF1_19360 YP_005655048.1 ABC transporter NC_012469.1.7686878. Protein 6e-34 44
TCCBUS3UF1_19360 YP_005655048.1 ABC transporter NC_008702.1.4606598. Protein 1e-27 43
TCCBUS3UF1_19360 YP_005655048.1 ABC transporter CP001581.1.gene798.p Protein 3e-35 42