Gene Information

Name : TCCBUS3UF1_18920 (TCCBUS3UF1_18920)
Accession : YP_005655004.1
Strain : Thermus sp. CCB_US3_UF1
Genome accession: NC_017278
Putative virulence/resistance : Virulence
Product : Response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1898072 - 1898710 bp
Length : 639 bp
Strand : -
Note : similar to Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain COG0745; similar to Response regulator of Deinococci UniRef RepID=Q5SMC3_THET8

DNA sequence : 
GTGGGGGAGCTGGTCAAGCGTTTCCTGGAGCGGGAGGGGTTTTCCGTGGCCTGGGTGCGCACGGGGCGAGAGGCCCTGGC
GCAGGCCTGGAAAGCCCCCAAGCCCGACCTGGTGGTCCTGGACCGGGGGCTTCCCGACCTGGAGGGCCTCGAGGTCCTAA
AGTCCCTGCGGGAGCTGGACCCCCTCCTGCCGGTCCTCCTCCTCACGGGCCGGGCCGACGAGGAGAGCCGGGTGGAGGGG
CTTCTGGAGGGGGCGGACGACTACCTGGGCAAGCCCTTCTCCCTCAAGGAGCTTCTGGCCCGCATCAAGGCCCTCCTGCG
CCGGGCGGGCAAGGAGGGGAGGCGGCGCTTCGGCCCCTTGGAGCTGGACCTGGAGGCCAGGAAGGCCTATTGGGAGGGGG
AGCCCCTCAGGCTTTCCGCCACGGAGATGAACCTCCTCCTGGCCCTGGCCCAGGCCCCGGGCCGGGTCTACACCCGGGGG
GAGCTTTTAGAGAGGGTCTGGGGCCCGGAGTTTGAGGGCTCGGAGCGGGTGGTGGACGCCTACATCCGCCTCCTGCGCAA
AAAGCTAAAGGACGACCCCCAAGCCCCCCGCTTCATTGAGACCGTGGTGGGGGTGGGGTACCGCTTCCTGGGGGAGTAG

Protein sequence : 
MGELVKRFLEREGFSVAWVRTGREALAQAWKAPKPDLVVLDRGLPDLEGLEVLKSLRELDPLLPVLLLTGRADEESRVEG
LLEGADDYLGKPFSLKELLARIKALLRRAGKEGRRRFGPLELDLEARKAYWEGEPLRLSATEMNLLLALAQAPGRVYTRG
ELLERVWGPEFEGSERVVDAYIRLLRKKLKDDPQAPRFIETVVGVGYRFLGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 7e-11 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TCCBUS3UF1_18920 YP_005655004.1 Response regulator NC_012469.1.7686381. Protein 2e-21 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TCCBUS3UF1_18920 YP_005655004.1 Response regulator VFG1390 Protein 4e-19 44
TCCBUS3UF1_18920 YP_005655004.1 Response regulator VFG1389 Protein 2e-20 42