Gene Information

Name : TCCBUS3UF1_18440 (TCCBUS3UF1_18440)
Accession : YP_005654957.1
Strain : Thermus sp. CCB_US3_UF1
Genome accession: NC_017278
Putative virulence/resistance : Virulence
Product : Two component transcriptional regulator PhoB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1850955 - 1851626 bp
Length : 672 bp
Strand : +
Note : similar to Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain COG0745; similar to Two component transcriptional regulator PhoB of Deinococci UniRef RepID=Q1J251_DEIGD

DNA sequence : 
GTGGCCACGGTGCTCTTGGTGGAGGACGAGCCGGCGGTGCGCCTGGGGGTGCGCCTGGCCCTGGAGCGGGCGGGGCACCG
GGTGCTGGAGGCGGGCAGCGCCGGTGAAGCCTGGCCCCTCCTGAAGGAGGCCGAGCTGGTGGTCCTGGACTGGATGCTCC
CCGACGAACCCGGGGTCAGGCTTCTGGAAAGGATGCGCCAGGGGGTCCACGCCGAGCTCCCCGTCCTCCTCCTCACCGCC
CGGGCCGAGGTGCGGGACCGGGTGGAGGGCCTAAGCCGGGGGGCGGACGATTACCTGGTCAAGCCCTTCGCCACCGAGGA
GCTTTTGGCCCGCCTCGAGGCCCTGCTGCGCCGGGCGGGCAAGCGCAAGGTGCTCAAGCGGGGCCCCCTCCTCCTGGACC
TGGAGCGCATGGAGGCAAGCCTAGAGGGCCAGCCCCTCCCCCTTACCCGGCGGGAGTTTGAGCTTTTGGCCTTCCTGGCC
CAGCGCCCGGGCCGGGTCTACACCCGGGAGGAGCTCCTGGAGGCCGTCTGGGGCCCCGACTACCTGGGCACCCCCAGGAC
GGTGGACCAGCACATCCTGCAGCTGAGGGAGAAGCTCCGGGAAGACCCCAAGGCCCCCCGCTTCCTGGAAACCGTGCGGG
GCCTGGGCTACCGCTTCCGGGGGGAAGGGTGA

Protein sequence : 
MATVLLVEDEPAVRLGVRLALERAGHRVLEAGSAGEAWPLLKEAELVVLDWMLPDEPGVRLLERMRQGVHAELPVLLLTA
RAEVRDRVEGLSRGADDYLVKPFATEELLARLEALLRRAGKRKVLKRGPLLLDLERMEASLEGQPLPLTRREFELLAFLA
QRPGRVYTREELLEAVWGPDYLGTPRTVDQHILQLREKLREDPKAPRFLETVRGLGYRFRGEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-17 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TCCBUS3UF1_18440 YP_005654957.1 Two component transcriptional regulator PhoB BAC0197 Protein 2e-22 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TCCBUS3UF1_18440 YP_005654957.1 Two component transcriptional regulator PhoB VFG1389 Protein 1e-21 42
TCCBUS3UF1_18440 YP_005654957.1 Two component transcriptional regulator PhoB VFG0473 Protein 2e-18 41