Gene Information

Name : TCCBUS3UF1_17960 (TCCBUS3UF1_17960)
Accession : YP_005654909.1
Strain : Thermus sp. CCB_US3_UF1
Genome accession: NC_017278
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1800820 - 1802778 bp
Length : 1959 bp
Strand : -
Note : similar to transketolase PRK05899; similar to Transketolase of Bacteria UniRef RepID=C6E250_GEOSM

DNA sequence :
ATGACCGATACCCAGGACCTCGAGGCCCTTTCGGTGAACGCCATCCGTTTCCTGGCCGTGGATGCGGTGGAGAAGGCCAG
AAGCGGCCACCCGGGGATGCCCATGGCCATGGCCCCCCTGGCCTACCTCCTGTACCGGGAGGCCATGCGCCACAACCCCC
TGGACCCCGCTTGGCCGGGCCGCGACCGGTTTGTGCTTTCCGCCGGGCACGGGTCCATGCTCCTCTATGCCGTCTTGCAC
CTCACCGGCTACCCCCTTCCCTTGGAGGAGATCCAGCGCTTCCGCCAATGGGGCTCCAAGACCCCTGGCCATCCCGAGCG
CGGGCACACCCCGGGGGTGGAGGTGACCACGGGGCCCTTGGGCCAGGGCCTCGCCACCGCGGTGGGCCTGGCCTTGGCCG
AGAGGAAGTTGGCCGCGGAGTTCAACCGCCCGGGGCACACCGTGGTGGACCACTACACCTATGTCCTGGCCTCGGACGGG
GACCTGATGGAGGGGGTATCCGGGGAGGCCAGCTCCCTGGCAGGGCACTGGCGGCTTTCCAAGCTCATCGTCTTCTGGGA
CGACAACCGCATCTCCATTGACGGCTCCACCGACCTGGCCTTCTCCGAGGAGGTCCTCCTCCGCTACCGCGCCTACGGCT
GGCAGACCCTCAGGGTGGAGGACGCCAACGACCTCCGGGCCCTGCGCCACGCCCTGAGGCTGGCCCAGATGGACGAGCGC
CCCAGCCTGATCGCCGTGCGCAGCCACATCGGCTACGGCTCCCCCAAGCAGGACTCCCCCAAGGCCCACGGCGAGCCCCT
GGGCCCCGAGGCCGTGGCCGCCACCCGGGAGCGCCTGGGCTGGCCTTACTCCCCCTTCGCCATCCCCGAGGAGGTCTATC
GCCACATGGACATGCGGGCCCAGGGCAAGGCCTGGCAGGAAGCCTGGGAAAGGGCCCTCGAGGCCTACGCCCGGGCCTAC
CCCGAGCTGTACCAAGAACTCCTCCGCCGCCTTCAGGGGGAGCTTCCCCCCTTGCCCGAAGAGCCCCCAGCCTTTGAGAA
GCCCCTGGCCACCCGGGCCGCCAGCGGTAAGGTCCTGGACCTTCTCGCCCCCCGCATGCCAGAACTTCTGGGGGGCAGCG
CCGACCTCACCCCCTCCAACAACACCCAGGCCCAGGGCATGGAGGACTTCTCCCCGGAAAACCCCCTGGGCCGCTACCTC
CACTTCGGGGTGCGGGAGCACGCCATGGGGGCCATCCTCAACGGGCTCAACCTCCACGGGGGGTTCCGCGCCTACGGGGG
TACCTTTTTGGTCTTCTCCGACTACCTGCGCCCCGCCCTGCGCCTGGCCGCCCTCATGGACACCCCCACGGTCTTCGTCT
TCACCCACGACTCCATCGCCTTGGGGGAGGACGGCCCCACCCATCAGCCGGTGGAGCACCTCCTCTCCCTCCGGGCCATG
CCCAACCTCTGGGTCATCCGCCCGGCGGACGCCCACGAGACCTTCTACGCCTGGCAGGTGGCCCTAAGGCGGCAGGAGGG
CCCCACCGCCTTGGTCCTCACCCGCCAGGCGGTGCCCCTCCTGCCCCGGGAGAAGGCCAAGGGGGCCCTCCGGGGAGGGT
ACGTCCTGGAGGACGCGGAGGAGCCGGAGGGCATCCTCTTGGCCACGGGGAGCGAGGTCCACCTGGCCCTCCAGGCCCGG
GCCCTCCTGGCGGCAAGGGGGCGGAGGGTGCGGGTGGTGAGCCTGCCCTGCCGGGAGCTCTTTGAGGCCCAGCCCGAGGC
CTACCGCCTCGAGGTCCTGCCCCCGGGGCTGCCCGTGGTGGCGGTGGAGGCGGGGGCTTCCCTGGGGTGGGAGCGGTACG
CCCAGCGGGTGGTGGGCCTGGACCGCTTTGGGGCCAGCGCCCCCTACCCCGAGGTTTACGAGCGCCTGGGCTTCACCCCG
GAACGGGTGGCGGAGGCCCTCCTGGACCTCCTGGTGTAG

Protein sequence :
MTDTQDLEALSVNAIRFLAVDAVEKARSGHPGMPMAMAPLAYLLYREAMRHNPLDPAWPGRDRFVLSAGHGSMLLYAVLH
LTGYPLPLEEIQRFRQWGSKTPGHPERGHTPGVEVTTGPLGQGLATAVGLALAERKLAAEFNRPGHTVVDHYTYVLASDG
DLMEGVSGEASSLAGHWRLSKLIVFWDDNRISIDGSTDLAFSEEVLLRYRAYGWQTLRVEDANDLRALRHALRLAQMDER
PSLIAVRSHIGYGSPKQDSPKAHGEPLGPEAVAATRERLGWPYSPFAIPEEVYRHMDMRAQGKAWQEAWERALEAYARAY
PELYQELLRRLQGELPPLPEEPPAFEKPLATRAASGKVLDLLAPRMPELLGGSADLTPSNNTQAQGMEDFSPENPLGRYL
HFGVREHAMGAILNGLNLHGGFRAYGGTFLVFSDYLRPALRLAALMDTPTVFVFTHDSIALGEDGPTHQPVEHLLSLRAM
PNLWVIRPADAHETFYAWQVALRRQEGPTALVLTRQAVPLLPREKAKGALRGGYVLEDAEEPEGILLATGSEVHLALQAR
ALLAARGRRVRVVSLPCRELFEAQPEAYRLEVLPPGLPVVAVEAGASLGWERYAQRVVGLDRFGASAPYPEVYERLGFTP
ERVAEALLDLLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 1e-132 50
tktA AAO17218.1 TktA Not tested tcd island Protein 2e-127 50