Gene Information

Name : TCCBUS3UF1_12500 (TCCBUS3UF1_12500)
Accession : YP_005654367.1
Strain : Thermus sp. CCB_US3_UF1
Genome accession: NC_017278
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1245824 - 1246507 bp
Length : 684 bp
Strand : -
Note : similar to lipoprotein transporter ATP-binding subunit PRK11629; similar to ABC transporter related protein of Truepera radiovictrix DSM 17093 UniRef RepID=D7CW30_9DEIN

DNA sequence : 
ATGCCCATTTTGGAAGCCAGGAACGTGCGCAAGGTTTACCGGGGGGACGGGGTGGAGACGGAGGCCCTGCGGGGGGTGAG
CCTGGCGGTGGAGGCCGGGGAGTTCACCGCCCTGGTGGGCCCCTCGGGGAGCGGCAAGAGCACCCTGCTCCACCTTCTGG
CGGGCCTGGACCTGCCCACGGAGGGGGAGGTTTGGGTGGGAGGGGTGCGGCTGGACCGCCTCAGCCGCTCCCAAAGGGCC
CGCTTCCGCTTGGAGAAGGTGGGGTTGGTCTTCCAGGCCTACAACCTCCTTCCCGTGCTCACCGCCTTGGAGAACGCCGC
CTTTGTCCTGGAGCTCCGGGGTCTTCCCCGGGCCGAGCGGGAACGGCGGGCCTGGGAGGCCCTGGCGGCCTTGGGCCTGG
CCGACAAGGCGGGGCGGTTTCCCCGCCAGCTTTCCGGGGGAGAGCAGCAGCGGGTGGCGGTGGCCCGGGCCCTGGCGGCG
GAACCCCTGATCGTCCTGGCCGACGAGCCCACCGCCAACCTGGACTCCCGCAACGGCCTGGCCCTGATCGAGCGGATGAA
GGCCCTGAACGAGGCCCGGGGCGTGACCTTCCTCTTCTCCACCCACGACCCCAGGCTTCTGGAGCACGTGAAGCGCATCG
TCCGCCTGGAGGACGGGCGGGTGGTGGGGGAGGAGCACGCCTAG

Protein sequence : 
MPILEARNVRKVYRGDGVETEALRGVSLAVEAGEFTALVGPSGSGKSTLLHLLAGLDLPTEGEVWVGGVRLDRLSRSQRA
RFRLEKVGLVFQAYNLLPVLTALENAAFVLELRGLPRAERERRAWEALAALGLADKAGRFPRQLSGGEQQRVAVARALAA
EPLIVLADEPTANLDSRNGLALIERMKALNEARGVTFLFSTHDPRLLEHVKRIVRLEDGRVVGEEHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 4e-08 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TCCBUS3UF1_12500 YP_005654367.1 ABC transporter NC_008702.1.4606598. Protein 9e-22 46
TCCBUS3UF1_12500 YP_005654367.1 ABC transporter CP001581.1.gene598.p Protein 5e-26 42