Gene Information

Name : TCCBUS3UF1_12440 (TCCBUS3UF1_12440)
Accession : YP_005654361.1
Strain : Thermus sp. CCB_US3_UF1
Genome accession: NC_017278
Putative virulence/resistance : Virulence
Product : 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseiheyensis
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1239902 - 1241452 bp
Length : 1551 bp
Strand : -
Note : similar to 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseiheyensis of Bacteria UniRef RepID=Q5SJP9_THET8

DNA sequence :
ATGAGGTACGCGGACCAGGTGGCGGGCATCCCCTGGGAGACCATTGAGGGGGTGCGGAGGCGCCTCAAGGAAAAGCCTGC
CCTGCACTTCATCGGGGGGAGGTTTTTACCCTCGGAGGACGGGGCCACCTTCCCCTCCCTGGACCCGGCCACGGGGGAGG
TCCTGGGGGAGGCGGCCAGGGGAGGGGAGAAGGAGGTGGACCGGGCGGCCCGGGCGGCCCATGAGGCCTTTTCCCGCTGG
CGGCGCACCCCGGCCCGGGAACGGAAGCGCTACCTCCTGCGGATCGCCGAGCTCATAGAGAAACGGGCCGACGAGCTGGC
GGTTACGGAGTGCCTGGACGCGGGGCAGGTCCTGAGGATCGTCCGGGCCCAGGTGGCCCGGGCGGCGGAGAACTTCGCCT
TCTACGCGGAGTACGCCGAGCACGCCATGGAGGACCGCACCTACCCCGTGGACGGGGAGTGGCTCTACTACGCCCTTAGG
GTCCCCGCGGGGCCGGTGGGCATCATCACCCCCTGGAACGCCCCCCTGATGCTCTCCACCTGGCGCATCGCCCCCGCCCT
GGCCTTCGGGGACACCGTGGTGCTGAAGCCGGCGGAGTGGAGCCCCTTCACCGCCAGCCTCCTGGCGGAGATCCTGCAGG
AGGCGGACCTGCCCCCCGGGGTCTTCAACCTGGTCCAGGGCTTTGGGGAGGAGGCGGGGGCGGCCTTGGTGGCCCATCCC
CTGGTGCCCCTCCTCACCCTTACGGGGGAGACGGAGACGGGGCGGATCGTGATGGCCAACGCCGCCCGCCACCTCAAGCG
GCTCTCCTTGGAGCTTGGGGGCAAGAGCCCGGCCCTGGTCTTCGCCGACGCCGACCTGGAGCGGGCCCTGGACGCCGTGG
TCTTCCAGATCTACTCCTTCAACGGGGAGAGGTGCACGGCAAGCTCCAGGCTCCTCCTAGAGGCCTCCATCTTTGAGGAC
TTCGTGGCCCAGGTGGCGGAGCGCACCCGGGCCATCCGCGTGGGCCACCCCCTGGACCCGGAGACGGAGGTGGGGCCCCT
CATCCACCCCGAGCACCTGGAGCGGGTCCTGGGCTACGTCCAGGCCGGGTTGGAGGAGGGGGCAAGGCTCCTGGTGGGCG
GGAAAAGGGCCTCCACCTCCTTCCGCGGGGAGGACCTGTCCCGGGGGAACTACCTGGAGCCCACCCTCTTCGTGGGGGAA
AACCACATGAAAATCGCCCAGGAGGAGATCTTCGGCCCCGTGCTGGTGGCCATCCCCTTCCGGGATGAGGAGGAGGCCCT
GAGGAAGGCCAACGACACCCCTTATGGCCTGGCGGCCTACGTCTTCACCCGGGACCTGGAGCGGGCCCACCGCCTGGCCC
TGGAGCTGGAGGCGGGGATGGTCTACCTCAACAGCCACAACGTCCGCCACCTCCCCACCCCCTTCGGCGGGGTCAAGGGG
AGCGGGGACCGGCGGGAAGGGGGCGTTTACGCCCTGGAGTTTTACACCGACCTCAAGAGCGTGGGGCTTCCCCTGAAGCC
CCCCCATGTGCCCAAGTTCGGCAGGAGGTAG

Protein sequence :
MRYADQVAGIPWETIEGVRRRLKEKPALHFIGGRFLPSEDGATFPSLDPATGEVLGEAARGGEKEVDRAARAAHEAFSRW
RRTPARERKRYLLRIAELIEKRADELAVTECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTYPVDGEWLYYALR
VPAGPVGIITPWNAPLMLSTWRIAPALAFGDTVVLKPAEWSPFTASLLAEILQEADLPPGVFNLVQGFGEEAGAALVAHP
LVPLLTLTGETETGRIVMANAARHLKRLSLELGGKSPALVFADADLERALDAVVFQIYSFNGERCTASSRLLLEASIFED
FVAQVAERTRAIRVGHPLDPETEVGPLIHPEHLERVLGYVQAGLEEGARLLVGGKRASTSFRGEDLSRGNYLEPTLFVGE
NHMKIAQEEIFGPVLVAIPFRDEEEALRKANDTPYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKG
SGDRREGGVYALEFYTDLKSVGLPLKPPHVPKFGRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 9e-91 48
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 9e-64 43
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-60 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-62 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-62 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-62 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-62 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TCCBUS3UF1_12440 YP_005654361.1 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseiheyensis VFG0082 Protein 6e-61 41