Gene Information

Name : sll0649 (SYNGTS_0390)
Accession : YP_005650343.1
Strain : Synechocystis sp. PCC 6803
Genome accession: NC_017277
Putative virulence/resistance : Virulence
Product : OmpR subfamily protein Rre3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 422772 - 423509 bp
Length : 738 bp
Strand : -
Note : ORF_ID:sll0649

DNA sequence : 
ATGTGGGGGAACAGGACTGAATTTATTGCCATGCCCAACATTTTAATCGTGGAAGATGACCAGGAAATCGCCCAGCTAAT
CAGGGAAACGTTGGAGCGAGAACAGTTTACCTGCATTGTCACCAATGATGGAGAAACTGGTTTAAGAATTTTCCAGGAAC
AGGTTCCAGATTTAATTGTGTTGGATTTGATGTTACCCAAATTGGATGGACTGGAAGTTTGTACCCGCATTCGCCAACAA
CCGGGCAGCAAAGACCCCTATATTCTGATGTTGACCGCCAAAGGGGAGGAGATCGACCGCATTATTGGCCTCTCCACCGG
GGCCGATGATTATTTGGTCAAACCCTTCAGTCCGAGGGAATTGGTCGCTAGGGTACGGGCCCTATTGCGGCGGCAATTGC
GCCAGGGGCAACCAGTGGGACAAATTTATCGTACAAACCATTTTCAGGTGGACCTAGACCAACATCAGGCGAGTCGTTAC
CAGGGCGATCGCCAGGAAGAGTTGGAGTTGACCGGGTTGGAATTTAATTTATTAGCTACGTTTATGAGCTATCCGGGGCG
GGTCTGGAATCGGACCCAATTAATTGAAAAGTTGTGGGGCAATGATTTTTTTGGCGATGAACGGGTGGTGGATACCCACA
TTCGTCGATTACGCAAGAAAATTGAACCGGACCCCGCTAATCCTACTTTTATTAAAACGGTGATCGGTTTGGGCTATAAG
TTTGAAGACCCTGATTAA

Protein sequence : 
MWGNRTEFIAMPNILIVEDDQEIAQLIRETLEREQFTCIVTNDGETGLRIFQEQVPDLIVLDLMLPKLDGLEVCTRIRQQ
PGSKDPYILMLTAKGEEIDRIIGLSTGADDYLVKPFSPRELVARVRALLRRQLRQGQPVGQIYRTNHFQVDLDQHQASRY
QGDRQEELELTGLEFNLLATFMSYPGRVWNRTQLIEKLWGNDFFGDERVVDTHIRRLRKKIEPDPANPTFIKTVIGLGYK
FEDPD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sll0649 YP_005650343.1 OmpR subfamily protein Rre3 CP001485.1.gene721.p Protein 2e-27 43
sll0649 YP_005650343.1 OmpR subfamily protein Rre3 NC_002952.2859905.p0 Protein 7e-37 43
sll0649 YP_005650343.1 OmpR subfamily protein Rre3 NC_002745.1124361.p0 Protein 1e-36 43
sll0649 YP_005650343.1 OmpR subfamily protein Rre3 NC_009782.5559369.p0 Protein 1e-36 43
sll0649 YP_005650343.1 OmpR subfamily protein Rre3 NC_002951.3237708.p0 Protein 1e-36 43
sll0649 YP_005650343.1 OmpR subfamily protein Rre3 NC_007622.3794472.p0 Protein 8e-37 43
sll0649 YP_005650343.1 OmpR subfamily protein Rre3 NC_002758.1121668.p0 Protein 1e-36 43
sll0649 YP_005650343.1 OmpR subfamily protein Rre3 NC_009641.5332272.p0 Protein 1e-36 43
sll0649 YP_005650343.1 OmpR subfamily protein Rre3 NC_013450.8614421.p0 Protein 1e-36 43
sll0649 YP_005650343.1 OmpR subfamily protein Rre3 NC_007793.3914279.p0 Protein 1e-36 43
sll0649 YP_005650343.1 OmpR subfamily protein Rre3 NC_010410.6002989.p0 Protein 3e-36 42
sll0649 YP_005650343.1 OmpR subfamily protein Rre3 NC_010400.5986590.p0 Protein 2e-35 42
sll0649 YP_005650343.1 OmpR subfamily protein Rre3 NC_011595.7057856.p0 Protein 3e-36 42
sll0649 YP_005650343.1 OmpR subfamily protein Rre3 CP000675.2.gene1535. Protein 1e-30 42
sll0649 YP_005650343.1 OmpR subfamily protein Rre3 HE999704.1.gene1528. Protein 1e-28 42
sll0649 YP_005650343.1 OmpR subfamily protein Rre3 HE999704.1.gene2815. Protein 1e-37 42
sll0649 YP_005650343.1 OmpR subfamily protein Rre3 AE000516.2.gene3505. Protein 3e-35 42
sll0649 YP_005650343.1 OmpR subfamily protein Rre3 AE015929.1.gene1106. Protein 2e-22 41
sll0649 YP_005650343.1 OmpR subfamily protein Rre3 NC_012469.1.7685629. Protein 1e-35 41
sll0649 YP_005650343.1 OmpR subfamily protein Rre3 AE016830.1.gene1681. Protein 6e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sll0649 YP_005650343.1 OmpR subfamily protein Rre3 VFG1702 Protein 1e-26 41