Gene Information

Name : kdpA (SYNGTS_1352)
Accession : YP_005651305.1
Strain : Synechocystis sp. PCC 6803
Genome accession: NC_017277
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1491842 - 1493518 bp
Length : 1677 bp
Strand : +
Note : ORF_ID:slr1728

DNA sequence :
ATGTTGCAAGGTTTTGTACAAATTGCATTAATTTTAGCTATCCTTGTGGCCACGGCCCCCTTGCTTGGGCGTTATATGGC
ACGGGTTTTTCTTGGTCAGTCCACTTGGCTCGATAAAATTGCCCGTCCTCTAGAGTCGTTGATTTTTGCCGGTTCCGGGA
TTACAAAACATCCCTCCATGGGAGCAACCCAATATGTTAGTGCTGCGCTGATCAGCAATCTGGTTATGGGGGTTTTTGTC
TTCCTAATCTTGATGTTCCAGGGCAGTTTACCCCTCAATCCCACGGGTTTAGCTGCTCCGTCTTGGGATTTGGCCCTACA
CACTGCCATTTCCTTTGTGACCAATACCAATCAACAACACTATTCCGGAGAAACGACCTACACCTACTTTAGTCAGGCTG
GAGCCCTAGGGTTTTTGATGTTCACTTCTGCGGCCACCGGCATTGCAGTGGCGATCGCCTTTATTCGGGGCCTAACCGGC
CAGGCGATCGGTAATTTTTACCAGGATTTAGTGCTATCAATTACTAGAATTTTATTGCCAATTTCCCTCGTGGGAGCAAT
ACTCCTCCTGGTGGCGGGGGTACCGGAAACCCTTGCGGGGCCAGCCCAGGTAACCACCCTGGAAGGGGCCACCCAATGGA
TTGCCCGGGGTCCGGTGGCCCATTTTGAAATCATCAAAGAACTAGGGGAAAATGGTGGCGGTTTTTTTGGTATAAACTCT
GCCCATCCCTTCGAAAATCCCAATAATTTTGCCAACCTCTTGGAAACGGTAATTATGATGGTGATTCCCGCCGGCCTCAT
CATTACTTACGGCATCATGGCAGGCAACCCCGAGCAAGGGTGGTTAATTTTTTGGATGGTGTTTATTCTTTATGGAATTC
TGATTGCCATTGCCGCTGTGGGGGAATTTCAAGGTAATCCTCTGATCAATCAAATTCTGGGGGAAACCCAACCCAATTTA
GAAGGTAAAGAAGTGCGCTTTGGTTGGGTATTAACGGCCCTGTGGGCTGTGTCCACAACGGGAACCATGTGTGGAGCAGT
CAACGGCATGCATGACTCCCTCATGCCCCCTGGGGGTTTTGTTACCCTATCGGACCTATTCCTGCAAATTATTTGGGGAG
GCCAGGGCACGGGCACAGCCTATCTGTTTGTGTTTCTCATCCTGACGGTTTTTCTCACTGGATTGATGGTGGGAAGGACA
CCGGAATTTTTGGGTCGCAAAATTGAGAAACGGGAAATTGTCCTCGCTAGCTTAATTCTTCTAATCCACCCCATTGCCAT
TTTAATTCCCACCGCTATCACCCTCGCCTTTCCTGACACCCTAGCGGGCATTAGTAATCCGGGCTTCCATGGCATTTCCC
AGGTGGCCTACGAATATGCTTCCGCCGCCGCCAACAATGGTTCTGGCTTTGAAGGTTTGGCGGATAACACTCTTTGGTGG
AATTTAAGCGCCAGTTTCTCGTTAATTGCCGGACGCTATGTACCAATTGTTGCCCTAATTTTCTTGGCAGATGGCATGGC
CCGCAAACAACCCGTTCCGGAAACCAGCGGTACTCTCCACACCGATACAACCCTATTCACCGGGATTACCGCCGGAGCCA
TCATCATCCTCGGTGCCCTGACCTTTTTGCCCATTTTGGTACTCGGTCCAGTGGCGGAAGCTTTCAATTTGGTTTAG

Protein sequence :
MLQGFVQIALILAILVATAPLLGRYMARVFLGQSTWLDKIARPLESLIFAGSGITKHPSMGATQYVSAALISNLVMGVFV
FLILMFQGSLPLNPTGLAAPSWDLALHTAISFVTNTNQQHYSGETTYTYFSQAGALGFLMFTSAATGIAVAIAFIRGLTG
QAIGNFYQDLVLSITRILLPISLVGAILLLVAGVPETLAGPAQVTTLEGATQWIARGPVAHFEIIKELGENGGGFFGINS
AHPFENPNNFANLLETVIMMVIPAGLIITYGIMAGNPEQGWLIFWMVFILYGILIAIAAVGEFQGNPLINQILGETQPNL
EGKEVRFGWVLTALWAVSTTGTMCGAVNGMHDSLMPPGGFVTLSDLFLQIIWGGQGTGTAYLFVFLILTVFLTGLMVGRT
PEFLGRKIEKREIVLASLILLIHPIAILIPTAITLAFPDTLAGISNPGFHGISQVAYEYASAAANNGSGFEGLADNTLWW
NLSASFSLIAGRYVPIVALIFLADGMARKQPVPETSGTLHTDTTLFTGITAGAIIILGALTFLPILVLGPVAEAFNLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpA YP_190030.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 1e-68 42
unnamed BAB43902.1 potassium-transporting ATPase(A chain) Not tested Type-II SCCmec Protein 1e-68 42
kdpA YP_251948.1 potassium-transporting ATPase subunit A Not tested SCCmec Protein 1e-67 42
SAR0070 YP_039538.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 1e-68 42
truncated-kdpA NP_370596.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 1e-68 42
kdpA NP_373308.2 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 1e-68 42
ef0087 AAM75290.1 EF0087 Not tested Not named Protein 2e-50 41
kdpA NP_814333.1 potassium-transporting ATPase subunit A Not tested Not named Protein 3e-50 41